Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 KRT16P3-201ENST00000439127 1283 ntBASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 AF131216.4-201ENST00000638924 1588 ntBASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40AQ8WXH6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 AC079630.1-202ENST00000618127 1840 ntBASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40AQ8WXH6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB40AQ8WXH6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40AQ8WXH6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 AC131274.2-201ENST00000580697 1507 ntBASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 MTDHP2-201ENST00000601468 714 ntBASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40AQ8WXH6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 AC010997.5-201ENST00000609182 354 ntBASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAB40AQ8WXH6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms