Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 AC092028.1-203ENST00000608262 953 ntBASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4IP1Q8WWV3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 AL353803.4-201ENST00000565882 1934 ntBASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RTN4IP1Q8WWV3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTN4IP1Q8WWV3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 AL024507.2-201ENST00000606070 2574 ntBASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 MIR6722-201ENST00000617286 78 ntBASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4IP1Q8WWV3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 AL035685.1-201ENST00000636663 812 ntBASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4IP1Q8WWV3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 AC080038.3-201ENST00000623346 1952 ntBASIC18.39■□□□□ 0.53
RTN4IP1Q8WWV3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms