Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCHCR1Q8TD31 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CCHCR1Q8TD31 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.25
CCHCR1Q8TD31 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCHCR1Q8TD31 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.83■■□□□ 1.25
CCHCR1Q8TD31 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCHCR1Q8TD31 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.83■■□□□ 1.25
CCHCR1Q8TD31 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CCHCR1Q8TD31 AC139530.1-201ENST00000575312 1977 ntBASIC22.83■■□□□ 1.24
CCHCR1Q8TD31 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.83■■□□□ 1.24
CCHCR1Q8TD31 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.82■■□□□ 1.24
CCHCR1Q8TD31 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCHCR1Q8TD31 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 SLC25A24-204ENST00000569674 2357 ntBASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 C11orf96-202ENST00000528572 1834 ntBASIC22.8■■□□□ 1.24
CCHCR1Q8TD31 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCHCR1Q8TD31 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 FP325331.1-202ENST00000623531 1380 ntBASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 LINC01529-204ENST00000636474 1715 ntBASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCHCR1Q8TD31 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 AC087742.1-201ENST00000575880 1738 ntBASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CCHCR1Q8TD31 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 AL356740.2-201ENST00000601559 647 ntBASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms