Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHKBP1Q8TBC3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 LINC01124-201ENST00000409786 2117 ntBASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
SHKBP1Q8TBC3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SHKBP1Q8TBC3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SHKBP1Q8TBC3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHKBP1Q8TBC3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 AC092437.1-201ENST00000624794 1048 ntBASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHKBP1Q8TBC3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 AC004812.2-201ENST00000611079 2094 ntBASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 AC068473.5-201ENST00000616428 2072 ntBASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 TERF1P2-201ENST00000583350 1212 ntBASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SHKBP1Q8TBC3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 AC079630.1-202ENST00000618127 1840 ntBASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 KRT18P14-201ENST00000534205 1250 ntBASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 AC105233.4-201ENST00000642045 216 ntBASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 LINC02228-203ENST00000641970 1355 ntBASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.11■■□□□ 1.29
SHKBP1Q8TBC3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 AL137784.2-201ENST00000607332 1000 ntBASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 RARRES2P11-201ENST00000635158 484 ntBASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHKBP1Q8TBC3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 AC090192.1-201ENST00000517740 490 ntBASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.09■■□□□ 1.29
SHKBP1Q8TBC3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms