Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 ALDH1A3-203ENST00000557963 1670 ntBASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 ESRRAP1-201ENST00000400596 1257 ntBASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 RPS2P4-201ENST00000476944 856 ntBASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 AC105036.2-201ENST00000569468 176 ntBASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CCDC168Q8NDH2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 MIR1224-201ENST00000408193 85 ntBASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC168Q8NDH2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 KRT87P-202ENST00000534226 1464 ntBASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC168Q8NDH2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 AC083880.1-201ENST00000608266 535 ntBASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 AL158047.1-201ENST00000445918 881 ntBASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 MIR4758-201ENST00000577688 71 ntBASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC168Q8NDH2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 MIR6089-201ENST00000616698 64 ntBASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 AC104187.1-201ENST00000607510 612 ntBASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 MYCNOS-205ENST00000641950 531 ntBASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC168Q8NDH2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms