Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSMEM1Q8N8F7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 MIR3621-201ENST00000580529 85 ntBASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 AL356740.2-201ENST00000601559 647 ntBASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
LSMEM1Q8N8F7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 LINC01960-201ENST00000563759 1884 ntBASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 AC004687.1-201ENST00000579003 1625 ntBASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LSMEM1Q8N8F7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.08■□□□□ 0.81
LSMEM1Q8N8F7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 AC139530.1-201ENST00000575312 1977 ntBASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.08■□□□□ 0.8
LSMEM1Q8N8F7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.07■□□□□ 0.8
LSMEM1Q8N8F7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 AC080038.3-201ENST00000623346 1952 ntBASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSMEM1Q8N8F7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSMEM1Q8N8F7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms