Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TRAM1L1Q8N609 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAM1L1Q8N609 LINC01960-201ENST00000563759 1884 ntBASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAM1L1Q8N609 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
TRAM1L1Q8N609 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 IGHV3-19-201ENST00000521488 291 ntBASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 AC019069.1-201ENST00000610008 1333 ntBASIC21.76■■□□□ 1.07
TRAM1L1Q8N609 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 AC105265.2-201ENST00000467189 838 ntBASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 AC087239.1-201ENST00000622671 572 ntBASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAM1L1Q8N609 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAM1L1Q8N609 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 TSPY26P-201ENST00000476365 1326 ntBASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAM1L1Q8N609 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 C9orf163-202ENST00000624034 2573 ntBASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 AC010141.3-201ENST00000456659 717 ntBASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRAM1L1Q8N609 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms