Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
NGEFQ8N5V2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 AC087742.1-201ENST00000575880 1738 ntBASIC29.02■■■□□ 2.24
NGEFQ8N5V2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
NGEFQ8N5V2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
NGEFQ8N5V2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.24
NGEFQ8N5V2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 AC133637.1-201ENST00000624115 1537 ntBASIC29.01■■■□□ 2.23
NGEFQ8N5V2 RARRES2P6-201ENST00000567333 442 ntBASIC29.01■■■□□ 2.23
NGEFQ8N5V2 MIR3181-201ENST00000578512 73 ntBASIC29.01■■■□□ 2.23
NGEFQ8N5V2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 AC004687.1-201ENST00000579003 1625 ntBASIC29.01■■■□□ 2.23
NGEFQ8N5V2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.01■■■□□ 2.23
NGEFQ8N5V2 AC233723.2-201ENST00000623798 2106 ntBASIC29■■■□□ 2.23
NGEFQ8N5V2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
NGEFQ8N5V2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
NGEFQ8N5V2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC29■■■□□ 2.23
NGEFQ8N5V2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
NGEFQ8N5V2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29■■■□□ 2.23
NGEFQ8N5V2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29■■■□□ 2.23
NGEFQ8N5V2 pRNA.6-201ENST00000610482 90 ntBASIC29■■■□□ 2.23
NGEFQ8N5V2 pRNA.5-201ENST00000612139 90 ntBASIC29■■■□□ 2.23
NGEFQ8N5V2 pRNA.11-201ENST00000618423 90 ntBASIC29■■■□□ 2.23
NGEFQ8N5V2 pRNA.13-201ENST00000619112 90 ntBASIC29■■■□□ 2.23
NGEFQ8N5V2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 AC008764.7-201ENST00000593779 1081 ntBASIC28.99■■■□□ 2.23
NGEFQ8N5V2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
NGEFQ8N5V2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 CA15P2-201ENST00000611168 834 ntBASIC28.98■■■□□ 2.23
NGEFQ8N5V2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
NGEFQ8N5V2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
NGEFQ8N5V2 AL117328.2-201ENST00000624617 1940 ntBASIC28.97■■■□□ 2.23
NGEFQ8N5V2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.97■■■□□ 2.23
NGEFQ8N5V2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
NGEFQ8N5V2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
NGEFQ8N5V2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
NGEFQ8N5V2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 LINC01960-201ENST00000563759 1884 ntBASIC28.96■■■□□ 2.23
NGEFQ8N5V2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NGEFQ8N5V2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
NGEFQ8N5V2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
NGEFQ8N5V2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
NGEFQ8N5V2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.95■■■□□ 2.22
NGEFQ8N5V2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
NGEFQ8N5V2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
NGEFQ8N5V2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
NGEFQ8N5V2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 AC026271.2-201ENST00000428091 497 ntBASIC28.94■■■□□ 2.22
NGEFQ8N5V2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 AL031602.1-201ENST00000633169 911 ntBASIC28.94■■■□□ 2.22
NGEFQ8N5V2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
NGEFQ8N5V2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NGEFQ8N5V2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NGEFQ8N5V2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NGEFQ8N5V2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
NGEFQ8N5V2 OR2I1P-207ENST00000453522 948 ntBASIC28.93■■■□□ 2.22
NGEFQ8N5V2 AC091305.1-201ENST00000479476 895 ntBASIC28.93■■■□□ 2.22
NGEFQ8N5V2 AC011298.3-201ENST00000615796 283 ntBASIC28.93■■■□□ 2.22
NGEFQ8N5V2 ECEL1P1-201ENST00000373592 1742 ntBASIC28.93■■■□□ 2.22
NGEFQ8N5V2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms