Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PROM2Q8N271 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PROM2Q8N271 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PROM2Q8N271 RPS2P52-201ENST00000469610 820 ntBASIC28.48■■■□□ 2.15
PROM2Q8N271 AC079140.4-201ENST00000507448 529 ntBASIC28.48■■■□□ 2.15
PROM2Q8N271 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PROM2Q8N271 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.48■■■□□ 2.15
PROM2Q8N271 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.48■■■□□ 2.15
PROM2Q8N271 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.48■■■□□ 2.15
PROM2Q8N271 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
PROM2Q8N271 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.47■■■□□ 2.15
PROM2Q8N271 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PROM2Q8N271 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.47■■■□□ 2.15
PROM2Q8N271 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.47■■■□□ 2.15
PROM2Q8N271 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.47■■■□□ 2.15
PROM2Q8N271 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.47■■■□□ 2.15
PROM2Q8N271 LINC01529-204ENST00000636474 1715 ntBASIC28.46■■■□□ 2.15
PROM2Q8N271 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PROM2Q8N271 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.46■■■□□ 2.15
PROM2Q8N271 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PROM2Q8N271 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.46■■■□□ 2.15
PROM2Q8N271 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.46■■■□□ 2.15
PROM2Q8N271 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
PROM2Q8N271 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
PROM2Q8N271 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PROM2Q8N271 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PROM2Q8N271 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
PROM2Q8N271 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PROM2Q8N271 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PROM2Q8N271 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.45■■■□□ 2.14
PROM2Q8N271 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PROM2Q8N271 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
PROM2Q8N271 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.44■■■□□ 2.14
PROM2Q8N271 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.44■■■□□ 2.14
PROM2Q8N271 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PROM2Q8N271 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.43■■■□□ 2.14
PROM2Q8N271 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PROM2Q8N271 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.43■■■□□ 2.14
PROM2Q8N271 KRT18P29-201ENST00000397031 1267 ntBASIC28.43■■■□□ 2.14
PROM2Q8N271 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PROM2Q8N271 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.43■■■□□ 2.14
PROM2Q8N271 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.43■■■□□ 2.14
PROM2Q8N271 AC104187.1-201ENST00000607510 612 ntBASIC28.43■■■□□ 2.14
PROM2Q8N271 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PROM2Q8N271 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PROM2Q8N271 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.42■■■□□ 2.14
PROM2Q8N271 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
PROM2Q8N271 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PROM2Q8N271 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC28.42■■■□□ 2.14
PROM2Q8N271 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.42■■■□□ 2.14
PROM2Q8N271 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.42■■■□□ 2.14
PROM2Q8N271 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PROM2Q8N271 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.41■■■□□ 2.14
PROM2Q8N271 AC144652.1-201ENST00000609974 1624 ntBASIC28.41■■■□□ 2.14
PROM2Q8N271 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.41■■■□□ 2.14
PROM2Q8N271 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.41■■■□□ 2.14
PROM2Q8N271 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PROM2Q8N271 AC098590.1-201ENST00000468126 897 ntBASIC28.4■■■□□ 2.14
PROM2Q8N271 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.4■■■□□ 2.14
PROM2Q8N271 AF201337.1-201ENST00000520239 748 ntBASIC28.4■■■□□ 2.14
PROM2Q8N271 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.4■■■□□ 2.14
PROM2Q8N271 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PROM2Q8N271 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PROM2Q8N271 UBE2DNL-204ENST00000602536 740 ntBASIC28.4■■■□□ 2.14
PROM2Q8N271 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PROM2Q8N271 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PROM2Q8N271 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PROM2Q8N271 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.4■■■□□ 2.14
PROM2Q8N271 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PROM2Q8N271 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.39■■■□□ 2.14
PROM2Q8N271 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PROM2Q8N271 CNN2P6-201ENST00000439038 900 ntBASIC28.39■■■□□ 2.14
PROM2Q8N271 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.39■■■□□ 2.14
PROM2Q8N271 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.39■■■□□ 2.14
PROM2Q8N271 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
PROM2Q8N271 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.39■■■□□ 2.13
PROM2Q8N271 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PROM2Q8N271 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.38■■■□□ 2.13
PROM2Q8N271 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PROM2Q8N271 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PROM2Q8N271 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.38■■■□□ 2.13
PROM2Q8N271 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.38■■■□□ 2.13
PROM2Q8N271 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PROM2Q8N271 AC133552.2-202ENST00000575694 574 ntBASIC28.38■■■□□ 2.13
PROM2Q8N271 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.38■■■□□ 2.13
PROM2Q8N271 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PROM2Q8N271 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PROM2Q8N271 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
PROM2Q8N271 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PROM2Q8N271 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC28.37■■■□□ 2.13
PROM2Q8N271 AC105036.2-201ENST00000569468 176 ntBASIC28.37■■■□□ 2.13
PROM2Q8N271 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.37■■■□□ 2.13
PROM2Q8N271 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PROM2Q8N271 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.37■■■□□ 2.13
PROM2Q8N271 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.37■■■□□ 2.13
PROM2Q8N271 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PROM2Q8N271 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PROM2Q8N271 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PROM2Q8N271 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PROM2Q8N271 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms