Protein–RNA interactions for Protein: Q8N1A0

KRT222, Keratin-like protein KRT222, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT222Q8N1A0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
KRT222Q8N1A0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 AC087393.1-201ENST00000582896 145 ntBASIC23.34■■□□□ 1.33
KRT222Q8N1A0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT222Q8N1A0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KRT222Q8N1A0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRT222Q8N1A0 ATP5G2P3-201ENST00000429083 425 ntBASIC23.33■■□□□ 1.33
KRT222Q8N1A0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KRT222Q8N1A0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
KRT222Q8N1A0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
KRT222Q8N1A0 AL157384.1-201ENST00000445995 2473 ntBASIC23.33■■□□□ 1.32
KRT222Q8N1A0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT222Q8N1A0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT222Q8N1A0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
KRT222Q8N1A0 FAM99A-202ENST00000538190 1989 ntBASIC23.32■■□□□ 1.32
KRT222Q8N1A0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
KRT222Q8N1A0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT222Q8N1A0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 AC080038.3-201ENST00000623346 1952 ntBASIC23.3■■□□□ 1.32
KRT222Q8N1A0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT222Q8N1A0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 AF106564.1-201ENST00000607058 2553 ntBASIC23.29■■□□□ 1.32
KRT222Q8N1A0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT222Q8N1A0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 AC012354.3-201ENST00000623734 483 ntBASIC23.28■■□□□ 1.32
KRT222Q8N1A0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT222Q8N1A0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.27■■□□□ 1.32
KRT222Q8N1A0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT222Q8N1A0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT222Q8N1A0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT222Q8N1A0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
KRT222Q8N1A0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
KRT222Q8N1A0 TSPY13P-201ENST00000338964 914 ntBASIC23.26■■□□□ 1.31
KRT222Q8N1A0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.26■■□□□ 1.31
KRT222Q8N1A0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.26■■□□□ 1.31
KRT222Q8N1A0 AL033527.3-201ENST00000566366 1196 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms