Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUDCD3Q8IVD9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NUDCD3Q8IVD9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NUDCD3Q8IVD9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NUDCD3Q8IVD9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 FAM99A-202ENST00000538190 1989 ntBASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUDCD3Q8IVD9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 PVT1_1.1-201ENST00000615125 194 ntBASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 AC074183.2-201ENST00000623112 922 ntBASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.75■■□□□ 1.07
NUDCD3Q8IVD9 AC010542.4-201ENST00000563151 1910 ntBASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 LINC01529-204ENST00000636474 1715 ntBASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUDCD3Q8IVD9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.73■■□□□ 1.07
NUDCD3Q8IVD9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms