Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 AC080038.3-201ENST00000623346 1952 ntBASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 BX664725.1-201ENST00000438252 379 ntBASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF3Q8IUI8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CRLF3Q8IUI8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CRLF3Q8IUI8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CRLF3Q8IUI8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CRLF3Q8IUI8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CRLF3Q8IUI8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CRLF3Q8IUI8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 KRT125P-201ENST00000546827 989 ntBASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CRLF3Q8IUI8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
CRLF3Q8IUI8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CRLF3Q8IUI8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CRLF3Q8IUI8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 MIR4281-201ENST00000580852 62 ntBASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.82■■□□□ 1.08
CRLF3Q8IUI8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 AC137630.3-201ENST00000607245 391 ntBASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 MIR4787-201ENST00000607364 84 ntBASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRLF3Q8IUI8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 AC087742.1-201ENST00000575880 1738 ntBASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms