Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 AL136116.3-201ENST00000402907 1138 ntBASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LDLRAD3Q86YD5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LDLRAD3Q86YD5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.64■□□□□ 0.58
LDLRAD3Q86YD5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.64■□□□□ 0.57
LDLRAD3Q86YD5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 AC004448.1-201ENST00000458332 883 ntBASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.63■□□□□ 0.57
LDLRAD3Q86YD5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 AL512631.2-201ENST00000604634 923 ntBASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 AC092667.1-201ENST00000434301 2586 ntBASIC18.62■□□□□ 0.57
LDLRAD3Q86YD5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAD3Q86YD5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 MIR4466-201ENST00000606121 54 ntBASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAD3Q86YD5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 ESRRAP2-201ENST00000418437 1549 ntBASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAD3Q86YD5 AC079630.1-202ENST00000618127 1840 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms