Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZC3HC1Q86WB0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.89■■□□□ 1.09
ZC3HC1Q86WB0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.89■■□□□ 1.09
ZC3HC1Q86WB0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZC3HC1Q86WB0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
ZC3HC1Q86WB0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 MIR6724-1-201ENST00000616420 92 ntBASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 MIR6724-2-201ENST00000616483 92 ntBASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 MIR6724-4-201ENST00000617390 92 ntBASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 MIR6724-3-201ENST00000622482 92 ntBASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3HC1Q86WB0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3HC1Q86WB0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.86■■□□□ 1.09
ZC3HC1Q86WB0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3HC1Q86WB0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 AL499627.2-201ENST00000606283 725 ntBASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3HC1Q86WB0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 AL117332.1-201ENST00000622628 974 ntBASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ZC3HC1Q86WB0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3HC1Q86WB0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3HC1Q86WB0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3HC1Q86WB0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3HC1Q86WB0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 CA15P2-201ENST00000611168 834 ntBASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3HC1Q86WB0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3HC1Q86WB0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms