Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC14.39□□□□□ -0.11
SCXQ7RTU7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCXQ7RTU7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.39□□□□□ -0.11
SCXQ7RTU7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCXQ7RTU7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 AL138724.1-201ENST00000606771 1088 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 AC011298.3-201ENST00000615796 283 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 AC241377.3-202ENST00000626088 1088 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 AC241585.3-202ENST00000628937 1088 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 AC245100.8-202ENST00000629247 1058 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 AL161729.1-201ENST00000604104 1402 ntBASIC14.38□□□□□ -0.11
SCXQ7RTU7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCXQ7RTU7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SCXQ7RTU7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 AC027682.1-201ENST00000562846 899 ntBASIC14.37□□□□□ -0.11
SCXQ7RTU7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.37□□□□□ -0.11
SCXQ7RTU7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCXQ7RTU7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 AC009086.3-201ENST00000623486 1008 ntBASIC14.36□□□□□ -0.11
SCXQ7RTU7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.36□□□□□ -0.11
SCXQ7RTU7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCXQ7RTU7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 AC006455.2-201ENST00000429931 906 ntBASIC14.35□□□□□ -0.11
SCXQ7RTU7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 CA15P2-201ENST00000611168 834 ntBASIC14.35□□□□□ -0.11
SCXQ7RTU7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 AL024507.2-201ENST00000606070 2574 ntBASIC14.35□□□□□ -0.11
SCXQ7RTU7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.35□□□□□ -0.11
SCXQ7RTU7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCXQ7RTU7 RASA4CP-201ENST00000424092 1398 ntBASIC14.34□□□□□ -0.11
SCXQ7RTU7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SCXQ7RTU7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.34□□□□□ -0.11
SCXQ7RTU7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.34□□□□□ -0.11
SCXQ7RTU7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCXQ7RTU7 AC026271.2-201ENST00000428091 497 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms