Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 ALDH1A3-203ENST00000557963 1670 ntBASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 AC004812.2-201ENST00000611079 2094 ntBASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM53Q6P2H8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 AC010997.5-201ENST00000609182 354 ntBASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM53Q6P2H8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM53Q6P2H8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 GUSBP5-201ENST00000418136 578 ntBASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 AC005703.6-201ENST00000623265 1329 ntBASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM53Q6P2H8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM53Q6P2H8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM53Q6P2H8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms