Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MRPL54Q6P161 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
MRPL54Q6P161 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.58■□□□□ 0.25
MRPL54Q6P161 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MRPL54Q6P161 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MRPL54Q6P161 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
MRPL54Q6P161 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 AL162393.1-201ENST00000437852 946 ntBASIC16.58■□□□□ 0.24
MRPL54Q6P161 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL54Q6P161 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
MRPL54Q6P161 AC010542.4-201ENST00000563151 1910 ntBASIC16.58■□□□□ 0.24
MRPL54Q6P161 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MRPL54Q6P161 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MRPL54Q6P161 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
MRPL54Q6P161 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.57■□□□□ 0.24
MRPL54Q6P161 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.57■□□□□ 0.24
MRPL54Q6P161 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL54Q6P161 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 AL157400.5-201ENST00000507624 621 ntBASIC16.56■□□□□ 0.24
MRPL54Q6P161 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MRPL54Q6P161 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL54Q6P161 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 AL157384.1-201ENST00000445995 2473 ntBASIC16.55■□□□□ 0.24
MRPL54Q6P161 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL54Q6P161 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MRPL54Q6P161 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MRPL54Q6P161 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MRPL54Q6P161 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MRPL54Q6P161 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPL54Q6P161 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 DUX4L11-201ENST00000611504 1267 ntBASIC16.54■□□□□ 0.24
MRPL54Q6P161 DUX4L12-201ENST00000614593 1267 ntBASIC16.54■□□□□ 0.24
MRPL54Q6P161 DUX4L14-201ENST00000621227 1267 ntBASIC16.54■□□□□ 0.24
MRPL54Q6P161 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MRPL54Q6P161 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL54Q6P161 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL54Q6P161 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL54Q6P161 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL54Q6P161 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms