Protein–RNA interactions for Protein: Q5VTT2

C9orf135, Protein C9orf135, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135Q5VTT2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf135Q5VTT2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 SUDS3P1-201ENST00000505831 966 ntBASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf135Q5VTT2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 AL136967.2-201ENST00000623968 743 ntBASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf135Q5VTT2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 MIR939-201ENST00000401314 82 ntBASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 AC027682.1-201ENST00000562846 899 ntBASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 AC126544.1-201ENST00000580842 1059 ntBASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 AC233992.3-201ENST00000607491 485 ntBASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf135Q5VTT2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 BX842568.3-201ENST00000418104 571 ntBASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C9orf135Q5VTT2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.39■□□□□ 0.7
C9orf135Q5VTT2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf135Q5VTT2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.39■□□□□ 0.7
C9orf135Q5VTT2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.39■□□□□ 0.7
C9orf135Q5VTT2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 CA15P2-201ENST00000611168 834 ntBASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.39■□□□□ 0.69
C9orf135Q5VTT2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 OR2I1P-207ENST00000453522 948 ntBASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 AC091305.1-201ENST00000479476 895 ntBASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf135Q5VTT2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
C9orf135Q5VTT2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms