Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 PKD1P6-201ENST00000343738 4769 ntBASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 ESRRAP2-201ENST00000418437 1549 ntBASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATPAF1Q5TC12 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 AL356441.2-201ENST00000443009 864 ntBASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATPAF1Q5TC12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.96■□□□□ 0.63
ATPAF1Q5TC12 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATPAF1Q5TC12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATPAF1Q5TC12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATPAF1Q5TC12 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATPAF1Q5TC12 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms