Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SGO1Q5FBB7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.3■■□□□ 1
SGO1Q5FBB7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SGO1Q5FBB7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SGO1Q5FBB7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.3■■□□□ 1
SGO1Q5FBB7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SGO1Q5FBB7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.29■■□□□ 1
SGO1Q5FBB7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGO1Q5FBB7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SGO1Q5FBB7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SGO1Q5FBB7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.29■■□□□ 1
SGO1Q5FBB7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.29■■□□□ 1
SGO1Q5FBB7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.29■■□□□ 1
SGO1Q5FBB7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.29■■□□□ 1
SGO1Q5FBB7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.29■■□□□ 1
SGO1Q5FBB7 C17orf82-201ENST00000623772 1530 ntBASIC21.29■■□□□ 1
SGO1Q5FBB7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SGO1Q5FBB7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SGO1Q5FBB7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SGO1Q5FBB7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 AC242852.2-201ENST00000615738 1807 ntBASIC21.28■■□□□ 1
SGO1Q5FBB7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.28■■□□□ 1
SGO1Q5FBB7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.28■■□□□ 1
SGO1Q5FBB7 AC087742.1-201ENST00000575880 1738 ntBASIC21.28■■□□□ 1
SGO1Q5FBB7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 AC004687.1-201ENST00000579003 1625 ntBASIC21.28■■□□□ 1
SGO1Q5FBB7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.28■■□□□ 1
SGO1Q5FBB7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SGO1Q5FBB7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SGO1Q5FBB7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SGO1Q5FBB7 AC080038.3-201ENST00000623346 1952 ntBASIC21.27■■□□□ 1
SGO1Q5FBB7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.27■■□□□ 1
SGO1Q5FBB7 AC009086.3-201ENST00000623486 1008 ntBASIC21.27■■□□□ 1
SGO1Q5FBB7 AC127496.7-201ENST00000625110 1798 ntBASIC21.27■■□□□ 1
SGO1Q5FBB7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.27■■□□□ 1
SGO1Q5FBB7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SGO1Q5FBB7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 AL117332.1-201ENST00000622628 974 ntBASIC21.25■□□□□ 0.99
SGO1Q5FBB7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SGO1Q5FBB7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGO1Q5FBB7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGO1Q5FBB7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGO1Q5FBB7 GUSBP5-201ENST00000418136 578 ntBASIC21.23■□□□□ 0.99
SGO1Q5FBB7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.23■□□□□ 0.99
SGO1Q5FBB7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.23■□□□□ 0.99
SGO1Q5FBB7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms