Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01559Q495D7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01559Q495D7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01559Q495D7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01559Q495D7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01559Q495D7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LINC01559Q495D7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LINC01559Q495D7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01559Q495D7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01559Q495D7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01559Q495D7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01559Q495D7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 KRT18P24-201ENST00000344739 1156 ntBASIC16.31■□□□□ 0.2
LINC01559Q495D7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 RARRES2P2-201ENST00000394842 485 ntBASIC16.31■□□□□ 0.2
LINC01559Q495D7 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 THA1P-201ENST00000590384 1145 ntBASIC16.31■□□□□ 0.2
LINC01559Q495D7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01559Q495D7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC01559Q495D7 RN7SL832P-201ENST00000607781 1756 ntBASIC16.31■□□□□ 0.2
LINC01559Q495D7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 KRT18P60-201ENST00000312876 1297 ntBASIC16.3■□□□□ 0.2
LINC01559Q495D7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01559Q495D7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01559Q495D7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01559Q495D7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01559Q495D7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01559Q495D7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01559Q495D7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINC01559Q495D7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC01559Q495D7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 AL121603.2-201ENST00000557373 2117 ntBASIC16.27■□□□□ 0.2
LINC01559Q495D7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01559Q495D7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC01559Q495D7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms