Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 PCL10YGL134W 1302 nt3.61□□□□□ -1.83
RRP40Q08285 SLM5YCR024C 1479 nt3.6□□□□□ -1.83
RRP40Q08285 SOF1YLL011W 1470 nt3.6□□□□□ -1.83
RRP40Q08285 MLH2YLR035C 2088 nt3.6□□□□□ -1.83
RRP40Q08285 PPZ1YML016C 2079 nt3.6□□□□□ -1.83
RRP40Q08285 TIM21YGR033C 720 nt3.6□□□□□ -1.83
RRP40Q08285 YPL162CYPL162C 822 nt3.6□□□□□ -1.83
RRP40Q08285 FRM2YCL026C-A 582 nt3.6□□□□□ -1.83
RRP40Q08285 SSU1YPL092W 1377 nt3.6□□□□□ -1.83
RRP40Q08285 NUS1YDL193W 1128 nt3.59□□□□□ -1.83
RRP40Q08285 HIS6YIL020C 786 nt3.59□□□□□ -1.83
RRP40Q08285 BNA1YJR025C 534 nt3.59□□□□□ -1.83
RRP40Q08285 MCM1YMR043W 861 nt3.59□□□□□ -1.83
RRP40Q08285 SNO1YMR095C 675 nt3.59□□□□□ -1.83
RRP40Q08285 UTP23YOR004W 765 nt3.59□□□□□ -1.83
RRP40Q08285 YPR150WYPR150W 522 nt3.59□□□□□ -1.83
RRP40Q08285 MCD4YKL165C 2760 nt3.58□□□□□ -1.84
RRP40Q08285 MTC4YBR255W 2085 nt3.58□□□□□ -1.84
RRP40Q08285 TCB3YML072C 4638 nt3.58□□□□□ -1.84
RRP40Q08285 PHO13YDL236W 939 nt3.58□□□□□ -1.84
RRP40Q08285 YER034WYER034W 558 nt3.58□□□□□ -1.84
RRP40Q08285 YGR079WYGR079W 1113 nt3.58□□□□□ -1.84
RRP40Q08285 YAE1YJR067C 426 nt3.58□□□□□ -1.84
RRP40Q08285 MYO3YKL129C 3819 nt3.58□□□□□ -1.84
RRP40Q08285 RSF1YMR030W 1131 nt3.58□□□□□ -1.84
RRP40Q08285 RAD17YOR368W 1206 nt3.58□□□□□ -1.84
RRP40Q08285 snR37snR37 386 nt3.58□□□□□ -1.84
RRP40Q08285 PRP19YLL036C 1512 nt3.58□□□□□ -1.84
RRP40Q08285 NOG1YPL093W 1944 nt3.58□□□□□ -1.84
RRP40Q08285 YCR050CYCR050C 309 nt3.57□□□□□ -1.84
RRP40Q08285 YGL193CYGL193C 312 nt3.57□□□□□ -1.84
RRP40Q08285 ECM34YHL043W 513 nt3.57□□□□□ -1.84
RRP40Q08285 RPO31YOR116C 4383 nt3.57□□□□□ -1.84
RRP40Q08285 ERG5YMR015C 1617 nt3.56□□□□□ -1.84
RRP40Q08285 IES6YEL044W 501 nt3.56□□□□□ -1.84
RRP40Q08285 YEL074WYEL074W 339 nt3.56□□□□□ -1.84
RRP40Q08285 FMP10YER182W 735 nt3.56□□□□□ -1.84
RRP40Q08285 YFR045WYFR045W 930 nt3.56□□□□□ -1.84
RRP40Q08285 YGL132WYGL132W 336 nt3.56□□□□□ -1.84
RRP40Q08285 YGL152CYGL152C 678 nt3.56□□□□□ -1.84
RRP40Q08285 GEP4YHR100C 558 nt3.56□□□□□ -1.84
RRP40Q08285 REC104YHR157W 549 nt3.56□□□□□ -1.84
RRP40Q08285 IDP2YLR174W 1239 nt3.56□□□□□ -1.84
RRP40Q08285 NIS1YNL078W 1224 nt3.56□□□□□ -1.84
RRP40Q08285 PRE2YPR103W 864 nt3.56□□□□□ -1.84
RRP40Q08285 YBR134WYBR134W 402 nt3.56□□□□□ -1.84
RRP40Q08285 BSD2YBR290W 966 nt3.56□□□□□ -1.84
RRP40Q08285 MCM7YBR202W 2538 nt3.55□□□□□ -1.84
RRP40Q08285 SWH1YAR042W 3567 nt3.55□□□□□ -1.84
RRP40Q08285 RNA14YMR061W 2034 nt3.55□□□□□ -1.84
RRP40Q08285 CLD1YGR110W 1338 nt3.55□□□□□ -1.84
RRP40Q08285 PRM2YIL037C 1971 nt3.55□□□□□ -1.84
RRP40Q08285 YCR085WYCR085W 354 nt3.55□□□□□ -1.84
RRP40Q08285 RPS0AYGR214W 759 nt3.55□□□□□ -1.84
RRP40Q08285 YKR047WYKR047W 306 nt3.55□□□□□ -1.84
RRP40Q08285 NCE103YNL036W 666 nt3.55□□□□□ -1.84
RRP40Q08285 INA17YPL099C 549 nt3.55□□□□□ -1.84
RRP40Q08285 UGA3YDL170W 1587 nt3.55□□□□□ -1.84
RRP40Q08285 YRM1YOR172W 2361 nt3.54□□□□□ -1.84
RRP40Q08285 GAC1YOR178C 2382 nt3.54□□□□□ -1.84
RRP40Q08285 TCM62YBR044C 1719 nt3.54□□□□□ -1.84
RRP40Q08285 RPB3YIL021W 957 nt3.54□□□□□ -1.84
RRP40Q08285 DPH1YIL103W 1278 nt3.54□□□□□ -1.84
RRP40Q08285 RPS31YLR167W 459 nt3.54□□□□□ -1.84
RRP40Q08285 YPR015CYPR015C 744 nt3.54□□□□□ -1.84
RRP40Q08285 FYV5YCL058C 459 nt3.54□□□□□ -1.84
RRP40Q08285 ALG11YNL048W 1647 nt3.54□□□□□ -1.84
RRP40Q08285 FAT1YBR041W 2010 nt3.54□□□□□ -1.84
RRP40Q08285 ZDS1YMR273C 2748 nt3.54□□□□□ -1.84
RRP40Q08285 CDC9YDL164C 2268 nt3.54□□□□□ -1.84
RRP40Q08285 RAD54YGL163C 2697 nt3.53□□□□□ -1.84
RRP40Q08285 SRS2YJL092W 3525 nt3.53□□□□□ -1.84
RRP40Q08285 RNA1YMR235C 1224 nt3.53□□□□□ -1.84
RRP40Q08285 COA2YPL189C-A 207 nt3.53□□□□□ -1.84
RRP40Q08285 NGL3YML118W 1518 nt3.53□□□□□ -1.84
RRP40Q08285 STV1YMR054W 2673 nt3.53□□□□□ -1.84
RRP40Q08285 AVT7YIL088C 1473 nt3.53□□□□□ -1.84
RRP40Q08285 SWI1YPL016W 3945 nt3.52□□□□□ -1.85
RRP40Q08285 FLO10YKR102W 3510 nt3.52□□□□□ -1.85
RRP40Q08285 SEG1YMR086W 2883 nt3.52□□□□□ -1.85
RRP40Q08285 HCA4YJL033W 2313 nt3.52□□□□□ -1.85
RRP40Q08285 YDR526CYDR526C 471 nt3.52□□□□□ -1.85
RRP40Q08285 YER076CYER076C 909 nt3.52□□□□□ -1.85
RRP40Q08285 SOP4YJL192C 705 nt3.52□□□□□ -1.85
RRP40Q08285 PSR1YLL010C 1284 nt3.52□□□□□ -1.85
RRP40Q08285 URA4YLR420W 1095 nt3.52□□□□□ -1.85
RRP40Q08285 VPS71YML041C 843 nt3.52□□□□□ -1.85
RRP40Q08285 COQ5YML110C 924 nt3.52□□□□□ -1.85
RRP40Q08285 YMR147WYMR147W 672 nt3.52□□□□□ -1.85
RRP40Q08285 IBD2YNL164C 1056 nt3.52□□□□□ -1.85
RRP40Q08285 YOR008W-BYOR008W-B 102 nt3.52□□□□□ -1.85
RRP40Q08285 YAR1YPL239W 603 nt3.52□□□□□ -1.85
RRP40Q08285 SCD6YPR129W 1050 nt3.52□□□□□ -1.85
RRP40Q08285 YBR103C-AYBR103C-A 144 nt3.52□□□□□ -1.85
RRP40Q08285 RKM4YDR257C 1485 nt3.52□□□□□ -1.85
RRP40Q08285 YGL140CYGL140C 3660 nt3.52□□□□□ -1.85
RRP40Q08285 BUD5YCR038C 1929 nt3.52□□□□□ -1.85
RRP40Q08285 XRS2YDR369C 2565 nt3.52□□□□□ -1.85
RRP40Q08285 SYF1YDR416W 2580 nt3.52□□□□□ -1.85
RRP40Q08285 CHD1YER164W 4407 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms