Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H1AQ02539 AC007375.3-201ENST00000600936 2314 ntBASIC16.71■□□□□ 0.27
HIST1H1AQ02539 AC005703.6-201ENST00000623265 1329 ntBASIC16.71■□□□□ 0.27
HIST1H1AQ02539 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 AL353803.4-201ENST00000565882 1934 ntBASIC16.71■□□□□ 0.27
HIST1H1AQ02539 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 KRT125P-201ENST00000546827 989 ntBASIC16.71■□□□□ 0.27
HIST1H1AQ02539 AC021242.3-201ENST00000607598 1377 ntBASIC16.71■□□□□ 0.27
HIST1H1AQ02539 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HIST1H1AQ02539 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HIST1H1AQ02539 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 AC242852.2-201ENST00000615738 1807 ntBASIC16.7■□□□□ 0.26
HIST1H1AQ02539 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H1AQ02539 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H1AQ02539 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 MIR6722-201ENST00000617286 78 ntBASIC16.68■□□□□ 0.26
HIST1H1AQ02539 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1AQ02539 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 RARRES2P1-201ENST00000474487 481 ntBASIC16.67■□□□□ 0.26
HIST1H1AQ02539 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1AQ02539 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 MTDHP2-201ENST00000601468 714 ntBASIC16.66■□□□□ 0.26
HIST1H1AQ02539 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms