Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 SMF1YOL122C 1728 nt4.32□□□□□ -1.72
RPA49Q01080 PHO13YDL236W 939 nt4.32□□□□□ -1.72
RPA49Q01080 YFR045WYFR045W 930 nt4.32□□□□□ -1.72
RPA49Q01080 LSB1YGR136W 726 nt4.32□□□□□ -1.72
RPA49Q01080 YJL218WYJL218W 591 nt4.32□□□□□ -1.72
RPA49Q01080 RAD10YML095C 633 nt4.32□□□□□ -1.72
RPA49Q01080 YMR084WYMR084W 789 nt4.32□□□□□ -1.72
RPA49Q01080 SPS4YOR313C 1017 nt4.32□□□□□ -1.72
RPA49Q01080 TGS1YPL157W 948 nt4.32□□□□□ -1.72
RPA49Q01080 EFM2YBR271W 1260 nt4.32□□□□□ -1.72
RPA49Q01080 THI7YLR237W 1797 nt4.32□□□□□ -1.72
RPA49Q01080 ARO80YDR421W 2853 nt4.32□□□□□ -1.72
RPA49Q01080 UBP10YNL186W 2379 nt4.31□□□□□ -1.72
RPA49Q01080 URC2YDR520C 2319 nt4.31□□□□□ -1.72
RPA49Q01080 SPC19YDR201W 498 nt4.31□□□□□ -1.72
RPA49Q01080 IRC22YEL001C 678 nt4.31□□□□□ -1.72
RPA49Q01080 YEL074WYEL074W 339 nt4.31□□□□□ -1.72
RPA49Q01080 SDT1YGL224C 843 nt4.31□□□□□ -1.72
RPA49Q01080 RPC17YJL011C 486 nt4.31□□□□□ -1.72
RPA49Q01080 RPL14AYKL006W 417 nt4.31□□□□□ -1.72
RPA49Q01080 MED7YOL135C 669 nt4.31□□□□□ -1.72
RPA49Q01080 SEC2YNL272C 2280 nt4.31□□□□□ -1.72
RPA49Q01080 LOS1YKL205W 3303 nt4.31□□□□□ -1.72
RPA49Q01080 TRF5YNL299W 1929 nt4.31□□□□□ -1.72
RPA49Q01080 YRB30YGL164C 1323 nt4.3□□□□□ -1.72
RPA49Q01080 TOG1YER184C 2385 nt4.3□□□□□ -1.72
RPA49Q01080 HSP30YCR021C 999 nt4.3□□□□□ -1.72
RPA49Q01080 RPL34AYER056C-A 366 nt4.3□□□□□ -1.72
RPA49Q01080 YHR069C-AYHR069C-A 363 nt4.3□□□□□ -1.72
RPA49Q01080 YMR075C-AYMR075C-A 366 nt4.3□□□□□ -1.72
RPA49Q01080 GPI12YMR281W 915 nt4.3□□□□□ -1.72
RPA49Q01080 MRPL37YBR268W 318 nt4.3□□□□□ -1.72
RPA49Q01080 NAM2YLR382C 2685 nt4.3□□□□□ -1.72
RPA49Q01080 GIP4YAL031C 2283 nt4.3□□□□□ -1.72
RPA49Q01080 ALR2YFL050C 2577 nt4.3□□□□□ -1.72
RPA49Q01080 POL31YJR006W 1464 nt4.3□□□□□ -1.72
RPA49Q01080 PTA1YAL043C 2358 nt4.29□□□□□ -1.72
RPA49Q01080 VAC7YNL054W 3498 nt4.29□□□□□ -1.72
RPA49Q01080 SIP1YDR422C 2448 nt4.29□□□□□ -1.72
RPA49Q01080 MSS2YDL107W 1056 nt4.29□□□□□ -1.72
RPA49Q01080 BUD16YEL029C 939 nt4.29□□□□□ -1.72
RPA49Q01080 YHB1YGR234W 1200 nt4.29□□□□□ -1.72
RPA49Q01080 HIS6YIL020C 786 nt4.29□□□□□ -1.72
RPA49Q01080 YML116W-AYML116W-A 303 nt4.29□□□□□ -1.72
RPA49Q01080 SPO20YMR017W 1194 nt4.29□□□□□ -1.72
RPA49Q01080 SHE1YBL031W 1017 nt4.29□□□□□ -1.72
RPA49Q01080 EOS1YNL080C 1101 nt4.29□□□□□ -1.72
RPA49Q01080 WRS1YOL097C 1299 nt4.29□□□□□ -1.72
RPA49Q01080 SLX1YBR228W 915 nt4.29□□□□□ -1.72
RPA49Q01080 PHO84YML123C 1764 nt4.28□□□□□ -1.72
RPA49Q01080 YCL068CYCL068C 783 nt4.28□□□□□ -1.72
RPA49Q01080 YDL026WYDL026W 312 nt4.28□□□□□ -1.72
RPA49Q01080 MRPL6YHR147C 645 nt4.28□□□□□ -1.72
RPA49Q01080 YMR130WYMR130W 909 nt4.28□□□□□ -1.72
RPA49Q01080 SIW14YNL032W 846 nt4.28□□□□□ -1.72
RPA49Q01080 RPS19AYOL121C 435 nt4.28□□□□□ -1.72
RPA49Q01080 snR37snR37 386 nt4.28□□□□□ -1.72
RPA49Q01080 SYF1YDR416W 2580 nt4.28□□□□□ -1.72
RPA49Q01080 VBA2YBR293W 1425 nt4.28□□□□□ -1.72
RPA49Q01080 PTR3YFR029W 2037 nt4.28□□□□□ -1.73
RPA49Q01080 APP1YNL094W 1764 nt4.27□□□□□ -1.73
RPA49Q01080 YCR101CYCR101C 549 nt4.27□□□□□ -1.73
RPA49Q01080 TFB3YDR460W 966 nt4.27□□□□□ -1.73
RPA49Q01080 CIR1YGR207C 786 nt4.27□□□□□ -1.73
RPA49Q01080 YHR112CYHR112C 1137 nt4.27□□□□□ -1.73
RPA49Q01080 DCS1YLR270W 1053 nt4.27□□□□□ -1.73
RPA49Q01080 YLR412C-AYLR412C-A 207 nt4.27□□□□□ -1.73
RPA49Q01080 PRX1YBL064C 786 nt4.27□□□□□ -1.73
RPA49Q01080 PMS1YNL082W 2622 nt4.27□□□□□ -1.73
RPA49Q01080 KIC1YHR102W 3243 nt4.26□□□□□ -1.73
RPA49Q01080 SLM5YCR024C 1479 nt4.26□□□□□ -1.73
RPA49Q01080 NUS1YDL193W 1128 nt4.26□□□□□ -1.73
RPA49Q01080 MAF1YDR005C 1188 nt4.26□□□□□ -1.73
RPA49Q01080 MRPS35YGR165W 1038 nt4.26□□□□□ -1.73
RPA49Q01080 PEX21YGR239C 867 nt4.26□□□□□ -1.73
RPA49Q01080 YJL028WYJL028W 336 nt4.26□□□□□ -1.73
RPA49Q01080 YLR363W-AYLR363W-A 258 nt4.26□□□□□ -1.73
RPA49Q01080 YBL036CYBL036C 774 nt4.26□□□□□ -1.73
RPA49Q01080 DSC2YOL073C 969 nt4.26□□□□□ -1.73
RPA49Q01080 SNF8YPL002C 702 nt4.26□□□□□ -1.73
RPA49Q01080 INA17YPL099C 549 nt4.26□□□□□ -1.73
RPA49Q01080 IDS2YJL146W 1410 nt4.26□□□□□ -1.73
RPA49Q01080 CHL1YPL008W 2586 nt4.26□□□□□ -1.73
RPA49Q01080 UGA3YDL170W 1587 nt4.26□□□□□ -1.73
RPA49Q01080 MDM34YGL219C 1380 nt4.26□□□□□ -1.73
RPA49Q01080 HOT1YMR172W 2160 nt4.26□□□□□ -1.73
RPA49Q01080 PRP19YLL036C 1512 nt4.26□□□□□ -1.73
RPA49Q01080 GAT2YMR136W 1683 nt4.26□□□□□ -1.73
RPA49Q01080 VPS73YGL104C 1461 nt4.25□□□□□ -1.73
RPA49Q01080 TAF12YDR145W 1620 nt4.25□□□□□ -1.73
RPA49Q01080 TPA1YER049W 1935 nt4.25□□□□□ -1.73
RPA49Q01080 NBP2YDR162C 711 nt4.25□□□□□ -1.73
RPA49Q01080 YHR032C-AYHR032C-A 120 nt4.25□□□□□ -1.73
RPA49Q01080 ASC1YMR116C 960 nt4.25□□□□□ -1.73
RPA49Q01080 TMA16YOR252W 537 nt4.25□□□□□ -1.73
RPA49Q01080 KIN4YOR233W 2403 nt4.25□□□□□ -1.73
RPA49Q01080 SAT4YCR008W 1812 nt4.24□□□□□ -1.73
RPA49Q01080 YDR161WYDR161W 1164 nt4.24□□□□□ -1.73
RPA49Q01080 AHA1YDR214W 1053 nt4.24□□□□□ -1.73
RPA49Q01080 YHL049CYHL049C 816 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms