Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YCR023CYCR023C 1836 nt5□□□□□ -1.61
SSL2Q00578 MOT2YER068W 1764 nt4.99□□□□□ -1.61
SSL2Q00578 OCT1YKL134C 2319 nt4.99□□□□□ -1.61
SSL2Q00578 MSS2YDL107W 1056 nt4.99□□□□□ -1.61
SSL2Q00578 BUD30YDL151C 582 nt4.99□□□□□ -1.61
SSL2Q00578 UBC1YDR177W 648 nt4.99□□□□□ -1.61
SSL2Q00578 CNL1YDR357C 369 nt4.99□□□□□ -1.61
SSL2Q00578 YGL230CYGL230C 444 nt4.99□□□□□ -1.61
SSL2Q00578 YGR270C-AYGR270C-A 219 nt4.99□□□□□ -1.61
SSL2Q00578 GPN3YLR243W 819 nt4.99□□□□□ -1.61
SSL2Q00578 YNL171CYNL171C 369 nt4.99□□□□□ -1.61
SSL2Q00578 MUM2YBR057C 1101 nt4.99□□□□□ -1.61
SSL2Q00578 SUA7YPR086W 1038 nt4.99□□□□□ -1.61
SSL2Q00578 YBR196C-BYBR196C-B 105 nt4.99□□□□□ -1.61
SSL2Q00578 REI1YBR267W 1182 nt4.99□□□□□ -1.61
SSL2Q00578 RIA1YNL163C 3333 nt4.99□□□□□ -1.61
SSL2Q00578 GAD1YMR250W 1758 nt4.99□□□□□ -1.61
SSL2Q00578 VBA2YBR293W 1425 nt4.98□□□□□ -1.61
SSL2Q00578 ALD3YMR169C 1521 nt4.98□□□□□ -1.61
SSL2Q00578 ALD2YMR170C 1521 nt4.98□□□□□ -1.61
SSL2Q00578 PMT4YJR143C 2289 nt4.98□□□□□ -1.61
SSL2Q00578 XKS1YGR194C 1803 nt4.98□□□□□ -1.61
SSL2Q00578 STR2YJR130C 1920 nt4.98□□□□□ -1.61
SSL2Q00578 YDL186WYDL186W 834 nt4.98□□□□□ -1.61
SSL2Q00578 RAD55YDR076W 1221 nt4.98□□□□□ -1.61
SSL2Q00578 NBP2YDR162C 711 nt4.98□□□□□ -1.61
SSL2Q00578 MRPL7YDR237W 879 nt4.98□□□□□ -1.61
SSL2Q00578 YHR028W-AYHR028W-A 321 nt4.98□□□□□ -1.61
SSL2Q00578 YHR069C-AYHR069C-A 363 nt4.98□□□□□ -1.61
SSL2Q00578 YIL102C-AYIL102C-A 228 nt4.98□□□□□ -1.61
SSL2Q00578 RFA3YJL173C 369 nt4.98□□□□□ -1.61
SSL2Q00578 YKL071WYKL071W 771 nt4.98□□□□□ -1.61
SSL2Q00578 YKR070WYKR070W 1059 nt4.98□□□□□ -1.61
SSL2Q00578 PML39YML107C 1005 nt4.98□□□□□ -1.61
SSL2Q00578 CUS2YNL286W 858 nt4.98□□□□□ -1.61
SSL2Q00578 MVD1YNR043W 1191 nt4.98□□□□□ -1.61
SSL2Q00578 SAS5YOR213C 747 nt4.98□□□□□ -1.61
SSL2Q00578 FDH1YOR388C 1131 nt4.98□□□□□ -1.61
SSL2Q00578 GRE1YPL223C 507 nt4.98□□□□□ -1.61
SSL2Q00578 MRP2YPR166C 348 nt4.98□□□□□ -1.61
SSL2Q00578 YBR134WYBR134W 402 nt4.98□□□□□ -1.61
SSL2Q00578 FAR10YLR238W 1437 nt4.97□□□□□ -1.61
SSL2Q00578 BTT1YDR252W 450 nt4.97□□□□□ -1.61
SSL2Q00578 YER133W-AYER133W-A 342 nt4.97□□□□□ -1.61
SSL2Q00578 YKR051WYKR051W 1257 nt4.97□□□□□ -1.61
SSL2Q00578 MRPS17YMR188C 714 nt4.97□□□□□ -1.61
SSL2Q00578 YBL094CYBL094C 333 nt4.97□□□□□ -1.61
SSL2Q00578 PNO1YOR145C 825 nt4.97□□□□□ -1.61
SSL2Q00578 HUA2YOR284W 732 nt4.97□□□□□ -1.61
SSL2Q00578 SSO1YPL232W 873 nt4.97□□□□□ -1.61
SSL2Q00578 MSC7YHR039C 1935 nt4.97□□□□□ -1.61
SSL2Q00578 TOG1YER184C 2385 nt4.97□□□□□ -1.61
SSL2Q00578 HRK1YOR267C 2280 nt4.97□□□□□ -1.61
SSL2Q00578 PRM2YIL037C 1971 nt4.96□□□□□ -1.61
SSL2Q00578 YDL162CYDL162C 357 nt4.96□□□□□ -1.62
SSL2Q00578 ERJ5YFR041C 888 nt4.96□□□□□ -1.62
SSL2Q00578 BUD13YGL174W 801 nt4.96□□□□□ -1.62
SSL2Q00578 SDT1YGL224C 843 nt4.96□□□□□ -1.62
SSL2Q00578 tS(AGA)D3tS(AGA)D3 83 nt4.96□□□□□ -1.62
SSL2Q00578 GSP1YLR293C 660 nt4.96□□□□□ -1.62
SSL2Q00578 MDJ2YNL328C 441 nt4.96□□□□□ -1.62
SSL2Q00578 MDM12YOL009C 816 nt4.96□□□□□ -1.62
SSL2Q00578 TPT1YOL102C 693 nt4.96□□□□□ -1.62
SSL2Q00578 YPR177CYPR177C 372 nt4.96□□□□□ -1.62
SSL2Q00578 DBP5YOR046C 1449 nt4.96□□□□□ -1.62
SSL2Q00578 BLM10YFL007W 6432 nt4.96□□□□□ -1.62
SSL2Q00578 CDC9YDL164C 2268 nt4.95□□□□□ -1.62
SSL2Q00578 RPN9YDR427W 1182 nt4.95□□□□□ -1.62
SSL2Q00578 SCS2YER120W 735 nt4.95□□□□□ -1.62
SSL2Q00578 YGL199CYGL199C 471 nt4.95□□□□□ -1.62
SSL2Q00578 LNP1YHR192W 837 nt4.95□□□□□ -1.62
SSL2Q00578 RCN1YKL159C 636 nt4.95□□□□□ -1.62
SSL2Q00578 YLL037WYLL037W 381 nt4.95□□□□□ -1.62
SSL2Q00578 MRPL39YML009C 213 nt4.95□□□□□ -1.62
SSL2Q00578 EAF7YNL136W 1278 nt4.95□□□□□ -1.62
SSL2Q00578 YNL162W-AYNL162W-A 219 nt4.95□□□□□ -1.62
SSL2Q00578 UFE1YOR075W 1041 nt4.95□□□□□ -1.62
SSL2Q00578 YOR152CYOR152C 771 nt4.95□□□□□ -1.62
SSL2Q00578 PDX3YBR035C 687 nt4.95□□□□□ -1.62
SSL2Q00578 EGT2YNL327W 3126 nt4.94□□□□□ -1.62
SSL2Q00578 YDL027CYDL027C 1263 nt4.94□□□□□ -1.62
SSL2Q00578 COS7YDL248W 1152 nt4.94□□□□□ -1.62
SSL2Q00578 SCEIQ0160 708 nt4.94□□□□□ -1.62
SSL2Q00578 LOH1YJL038C 660 nt4.94□□□□□ -1.62
SSL2Q00578 COS5YJR161C 1152 nt4.94□□□□□ -1.62
SSL2Q00578 REH1YLR387C 1299 nt4.94□□□□□ -1.62
SSL2Q00578 SKM1YOL113W 1968 nt4.94□□□□□ -1.62
SSL2Q00578 PMC1YGL006W 3522 nt4.94□□□□□ -1.62
SSL2Q00578 HOT1YMR172W 2160 nt4.94□□□□□ -1.62
SSL2Q00578 GAS5YOL030W 1455 nt4.94□□□□□ -1.62
SSL2Q00578 snR7-LsnR7-L 214 nt4.93□□□□□ -1.62
SSL2Q00578 YFR032C-BYFR032C-B 264 nt4.93□□□□□ -1.62
SSL2Q00578 YGL214WYGL214W 486 nt4.93□□□□□ -1.62
SSL2Q00578 MRPS35YGR165W 1038 nt4.93□□□□□ -1.62
SSL2Q00578 LDB18YLL049W 540 nt4.93□□□□□ -1.62
SSL2Q00578 NSE1YLR007W 1011 nt4.93□□□□□ -1.62
SSL2Q00578 USB1YLR132C 873 nt4.93□□□□□ -1.62
SSL2Q00578 TIS11YLR136C 858 nt4.93□□□□□ -1.62
SSL2Q00578 SUB1YMR039C 879 nt4.93□□□□□ -1.62
SSL2Q00578 YNL050CYNL050C 813 nt4.93□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms