Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SIRPAP78324 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.96■□□□□ 0.79
SIRPAP78324 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SIRPAP78324 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.96■□□□□ 0.79
SIRPAP78324 EDA-201ENST00000338901 1233 ntBASIC19.96■□□□□ 0.79
SIRPAP78324 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
SIRPAP78324 AL355001.2-201ENST00000620617 1191 ntBASIC19.96■□□□□ 0.79
SIRPAP78324 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SIRPAP78324 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SIRPAP78324 ECEL1P1-201ENST00000373592 1742 ntBASIC19.96■□□□□ 0.79
SIRPAP78324 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
SIRPAP78324 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPAP78324 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SIRPAP78324 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SIRPAP78324 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.95■□□□□ 0.78
SIRPAP78324 AF213884.3-201ENST00000563833 479 ntBASIC19.95■□□□□ 0.78
SIRPAP78324 AL031432.3-201ENST00000607698 485 ntBASIC19.95■□□□□ 0.78
SIRPAP78324 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SIRPAP78324 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SIRPAP78324 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 AC127496.7-201ENST00000625110 1798 ntBASIC19.95■□□□□ 0.78
SIRPAP78324 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPAP78324 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.95■□□□□ 0.78
SIRPAP78324 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.94■□□□□ 0.78
SIRPAP78324 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
SIRPAP78324 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SIRPAP78324 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPAP78324 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
SIRPAP78324 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SIRPAP78324 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.93■□□□□ 0.78
SIRPAP78324 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.93■□□□□ 0.78
SIRPAP78324 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 pRNA.6-201ENST00000610482 90 ntBASIC19.93■□□□□ 0.78
SIRPAP78324 pRNA.5-201ENST00000612139 90 ntBASIC19.93■□□□□ 0.78
SIRPAP78324 pRNA.11-201ENST00000618423 90 ntBASIC19.93■□□□□ 0.78
SIRPAP78324 pRNA.13-201ENST00000619112 90 ntBASIC19.93■□□□□ 0.78
SIRPAP78324 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.93■□□□□ 0.78
SIRPAP78324 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.93■□□□□ 0.78
SIRPAP78324 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.93■□□□□ 0.78
SIRPAP78324 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SIRPAP78324 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
SIRPAP78324 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPAP78324 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.92■□□□□ 0.78
SIRPAP78324 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 MIR3181-201ENST00000578512 73 ntBASIC19.92■□□□□ 0.78
SIRPAP78324 AC011298.3-201ENST00000615796 283 ntBASIC19.92■□□□□ 0.78
SIRPAP78324 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPAP78324 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.92■□□□□ 0.78
SIRPAP78324 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIRPAP78324 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPAP78324 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
SIRPAP78324 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
SIRPAP78324 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SIRPAP78324 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPAP78324 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms