Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB11AP62491 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB11AP62491 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RAB11AP62491 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB11AP62491 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB11AP62491 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAB11AP62491 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11AP62491 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11AP62491 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB11AP62491 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB11AP62491 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.76■□□□□ 0.43
RAB11AP62491 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB11AP62491 AC092053.2-201ENST00000640557 1818 ntBASIC17.76■□□□□ 0.43
RAB11AP62491 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
RAB11AP62491 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAB11AP62491 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11AP62491 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB11AP62491 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB11AP62491 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 AL353803.4-201ENST00000565882 1934 ntBASIC17.75■□□□□ 0.43
RAB11AP62491 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB11AP62491 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB11AP62491 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11AP62491 AL121603.2-201ENST00000557373 2117 ntBASIC17.75■□□□□ 0.43
RAB11AP62491 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB11AP62491 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB11AP62491 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB11AP62491 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB11AP62491 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RAB11AP62491 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB11AP62491 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB11AP62491 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB11AP62491 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB11AP62491 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 RARRES2P2-201ENST00000394842 485 ntBASIC17.73■□□□□ 0.43
RAB11AP62491 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB11AP62491 U85056.1-201ENST00000616429 682 ntBASIC17.73■□□□□ 0.43
RAB11AP62491 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB11AP62491 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB11AP62491 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB11AP62491 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB11AP62491 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB11AP62491 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB11AP62491 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB11AP62491 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB11AP62491 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB11AP62491 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB11AP62491 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB11AP62491 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB11AP62491 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
RAB11AP62491 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB11AP62491 AC004448.1-201ENST00000458332 883 ntBASIC17.72■□□□□ 0.43
RAB11AP62491 AC120024.1-201ENST00000562672 995 ntBASIC17.72■□□□□ 0.43
RAB11AP62491 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB11AP62491 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RAB11AP62491 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB11AP62491 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB11AP62491 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB11AP62491 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB11AP62491 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms