Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.31■□□□□ 0.68
LSM6P62312 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 pRNA.6-201ENST00000610482 90 ntBASIC19.31■□□□□ 0.68
LSM6P62312 pRNA.5-201ENST00000612139 90 ntBASIC19.31■□□□□ 0.68
LSM6P62312 pRNA.11-201ENST00000618423 90 ntBASIC19.31■□□□□ 0.68
LSM6P62312 pRNA.13-201ENST00000619112 90 ntBASIC19.31■□□□□ 0.68
LSM6P62312 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM6P62312 AC133637.1-201ENST00000624115 1537 ntBASIC19.3■□□□□ 0.68
LSM6P62312 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 AC006455.2-201ENST00000429931 906 ntBASIC19.3■□□□□ 0.68
LSM6P62312 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.3■□□□□ 0.68
LSM6P62312 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM6P62312 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
LSM6P62312 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.29■□□□□ 0.68
LSM6P62312 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LSM6P62312 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.29■□□□□ 0.68
LSM6P62312 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LSM6P62312 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM6P62312 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM6P62312 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.28■□□□□ 0.68
LSM6P62312 CA15P2-201ENST00000611168 834 ntBASIC19.28■□□□□ 0.68
LSM6P62312 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM6P62312 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM6P62312 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM6P62312 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM6P62312 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
LSM6P62312 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LSM6P62312 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM6P62312 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LSM6P62312 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.27■□□□□ 0.68
LSM6P62312 MIR3181-201ENST00000578512 73 ntBASIC19.27■□□□□ 0.68
LSM6P62312 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM6P62312 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM6P62312 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM6P62312 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LSM6P62312 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM6P62312 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSM6P62312 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
LSM6P62312 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.27■□□□□ 0.67
LSM6P62312 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM6P62312 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LSM6P62312 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
LSM6P62312 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LSM6P62312 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.26■□□□□ 0.67
LSM6P62312 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.26■□□□□ 0.67
LSM6P62312 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM6P62312 DUX4L19-201ENST00000557448 1267 ntBASIC19.26■□□□□ 0.67
LSM6P62312 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM6P62312 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM6P62312 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LSM6P62312 EP400NL-214ENST00000641289 2402 ntBASIC19.26■□□□□ 0.67
LSM6P62312 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM6P62312 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.25■□□□□ 0.67
LSM6P62312 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM6P62312 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
LSM6P62312 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LSM6P62312 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
LSM6P62312 AC139530.1-201ENST00000575312 1977 ntBASIC19.25■□□□□ 0.67
LSM6P62312 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM6P62312 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM6P62312 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms