Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN20P56880 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN20P56880 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN20P56880 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN20P56880 FP325331.1-202ENST00000623531 1380 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN20P56880 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN20P56880 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN20P56880 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN20P56880 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN20P56880 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN20P56880 pRNA.6-201ENST00000610482 90 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 pRNA.5-201ENST00000612139 90 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 pRNA.11-201ENST00000618423 90 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 pRNA.13-201ENST00000619112 90 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN20P56880 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN20P56880 LINC01529-204ENST00000636474 1715 ntBASIC20.1■□□□□ 0.81
CLDN20P56880 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN20P56880 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN20P56880 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN20P56880 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN20P56880 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN20P56880 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CLDN20P56880 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CLDN20P56880 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN20P56880 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN20P56880 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN20P56880 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN20P56880 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN20P56880 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN20P56880 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN20P56880 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN20P56880 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN20P56880 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN20P56880 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN20P56880 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.08■□□□□ 0.81
CLDN20P56880 DUX4L4-201ENST00000566884 1269 ntBASIC20.08■□□□□ 0.81
CLDN20P56880 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN20P56880 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN20P56880 ANOS2P-203ENST00000472227 1816 ntBASIC20.08■□□□□ 0.8
CLDN20P56880 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CLDN20P56880 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CLDN20P56880 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN20P56880 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN20P56880 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN20P56880 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN20P56880 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN20P56880 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN20P56880 MIR4767-201ENST00000582827 78 ntBASIC20.07■□□□□ 0.8
CLDN20P56880 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
CLDN20P56880 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN20P56880 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN20P56880 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN20P56880 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN20P56880 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN20P56880 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 AC133561.4-201ENST00000566112 224 ntBASIC20.06■□□□□ 0.8
CLDN20P56880 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 LINC00526-201ENST00000581067 1875 ntBASIC20.06■□□□□ 0.8
CLDN20P56880 AC011298.3-201ENST00000615796 283 ntBASIC20.06■□□□□ 0.8
CLDN20P56880 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN20P56880 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN20P56880 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN20P56880 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
CLDN20P56880 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN20P56880 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN20P56880 AC127496.7-201ENST00000625110 1798 ntBASIC20.06■□□□□ 0.8
CLDN20P56880 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CLDN20P56880 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN20P56880 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 AC005837.3-201ENST00000612163 286 ntBASIC20.05■□□□□ 0.8
CLDN20P56880 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN20P56880 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN20P56880 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN20P56880 AL031432.3-201ENST00000607698 485 ntBASIC20.04■□□□□ 0.8
CLDN20P56880 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN20P56880 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.04■□□□□ 0.8
CLDN20P56880 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN20P56880 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN20P56880 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN20P56880 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN20P56880 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN20P56880 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN20P56880 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN20P56880 AL499627.2-201ENST00000606283 725 ntBASIC20.03■□□□□ 0.8
CLDN20P56880 AC136469.2-201ENST00000623944 1028 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms