Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YPR003CYPR003C 2265 nt3.86□□□□□ -1.79
YNL040WP53960 SIR1YKR101W 1965 nt3.86□□□□□ -1.79
YNL040WP53960 RCR2YDR003W 633 nt3.86□□□□□ -1.79
YNL040WP53960 YDR274CYDR274C 372 nt3.86□□□□□ -1.79
YNL040WP53960 YEL074WYEL074W 339 nt3.86□□□□□ -1.79
YNL040WP53960 DSD1YGL196W 1287 nt3.86□□□□□ -1.79
YNL040WP53960 YIL014C-AYIL014C-A 315 nt3.86□□□□□ -1.79
YNL040WP53960 YJR112W-AYJR112W-A 330 nt3.86□□□□□ -1.79
YNL040WP53960 KTR2YKR061W 1278 nt3.86□□□□□ -1.79
YNL040WP53960 RSF1YMR030W 1131 nt3.86□□□□□ -1.79
YNL040WP53960 YOR008W-BYOR008W-B 102 nt3.86□□□□□ -1.79
YNL040WP53960 OSW1YOR255W 837 nt3.86□□□□□ -1.79
YNL040WP53960 GLN4YOR168W 2430 nt3.86□□□□□ -1.79
YNL040WP53960 PCL10YGL134W 1302 nt3.86□□□□□ -1.79
YNL040WP53960 MCP2YLR253W 1710 nt3.86□□□□□ -1.79
YNL040WP53960 TCB3YML072C 4638 nt3.86□□□□□ -1.79
YNL040WP53960 LPP1YDR503C 825 nt3.85□□□□□ -1.79
YNL040WP53960 URA4YLR420W 1095 nt3.85□□□□□ -1.79
YNL040WP53960 PFA4YOL003C 1137 nt3.85□□□□□ -1.79
YNL040WP53960 FDH1YOR388C 1131 nt3.85□□□□□ -1.79
YNL040WP53960 PDR12YPL058C 4536 nt3.85□□□□□ -1.79
YNL040WP53960 YPR022CYPR022C 3402 nt3.85□□□□□ -1.79
YNL040WP53960 YDR271CYDR271C 372 nt3.84□□□□□ -1.79
YNL040WP53960 IES6YEL044W 501 nt3.84□□□□□ -1.79
YNL040WP53960 YGL074CYGL074C 327 nt3.84□□□□□ -1.79
YNL040WP53960 YGR051CYGR051C 324 nt3.84□□□□□ -1.79
YNL040WP53960 MFM1YPL060W 1242 nt3.84□□□□□ -1.79
YNL040WP53960 YBR219CYBR219C 384 nt3.84□□□□□ -1.79
YNL040WP53960 TFA1YKL028W 1449 nt3.84□□□□□ -1.79
YNL040WP53960 PFA5YDR459C 1125 nt3.83□□□□□ -1.8
YNL040WP53960 YDR526CYDR526C 471 nt3.83□□□□□ -1.8
YNL040WP53960 YRA2YKL214C 612 nt3.83□□□□□ -1.8
YNL040WP53960 IES3YLR052W 753 nt3.83□□□□□ -1.8
YNL040WP53960 MCM1YMR043W 861 nt3.83□□□□□ -1.8
YNL040WP53960 SET6YPL165C 1122 nt3.83□□□□□ -1.8
YNL040WP53960 FMP30YPL103C 1407 nt3.83□□□□□ -1.8
YNL040WP53960 RKM4YDR257C 1485 nt3.83□□□□□ -1.8
YNL040WP53960 NUP133YKR082W 3474 nt3.82□□□□□ -1.8
YNL040WP53960 MTR10YOR160W 2919 nt3.82□□□□□ -1.8
YNL040WP53960 STV1YMR054W 2673 nt3.82□□□□□ -1.8
YNL040WP53960 CDC45YLR103C 1953 nt3.82□□□□□ -1.8
YNL040WP53960 PUT2YHR037W 1728 nt3.82□□□□□ -1.8
YNL040WP53960 MNT4YNR059W 1743 nt3.82□□□□□ -1.8
YNL040WP53960 MOB2YFL034C-B 864 nt3.82□□□□□ -1.8
YNL040WP53960 RTA1YGR213C 954 nt3.82□□□□□ -1.8
YNL040WP53960 ORM2YLR350W 651 nt3.82□□□□□ -1.8
YNL040WP53960 HMT1YBR034C 1047 nt3.82□□□□□ -1.8
YNL040WP53960 POF1YCL047C 777 nt3.82□□□□□ -1.8
YNL040WP53960 TCO89YPL180W 2400 nt3.82□□□□□ -1.8
YNL040WP53960 GIP4YAL031C 2283 nt3.82□□□□□ -1.8
YNL040WP53960 HMG1YML075C 3165 nt3.81□□□□□ -1.8
YNL040WP53960 RAD26YJR035W 3258 nt3.81□□□□□ -1.8
YNL040WP53960 ENT1YDL161W 1365 nt3.81□□□□□ -1.8
YNL040WP53960 BOI2YER114C 3123 nt3.81□□□□□ -1.8
YNL040WP53960 MMS2YGL087C 414 nt3.81□□□□□ -1.8
YNL040WP53960 RPS0AYGR214W 759 nt3.81□□□□□ -1.8
YNL040WP53960 WSS1YHR134W 810 nt3.81□□□□□ -1.8
YNL040WP53960 CDC8YJR057W 651 nt3.81□□□□□ -1.8
YNL040WP53960 RPS31YLR167W 459 nt3.81□□□□□ -1.8
YNL040WP53960 MTR4YJL050W 3222 nt3.8□□□□□ -1.8
YNL040WP53960 RDS1YCR106W 2499 nt3.8□□□□□ -1.8
YNL040WP53960 YCR050CYCR050C 309 nt3.8□□□□□ -1.8
YNL040WP53960 TIM21YGR033C 720 nt3.8□□□□□ -1.8
YNL040WP53960 GMH1YKR030W 822 nt3.8□□□□□ -1.8
YNL040WP53960 YLL017WYLL017W 312 nt3.8□□□□□ -1.8
YNL040WP53960 COX19YLL018C-A 297 nt3.8□□□□□ -1.8
YNL040WP53960 MED7YOL135C 669 nt3.8□□□□□ -1.8
YNL040WP53960 REG2YBR050C 1017 nt3.8□□□□□ -1.8
YNL040WP53960 ANT1YPR128C 987 nt3.8□□□□□ -1.8
YNL040WP53960 BSD2YBR290W 966 nt3.8□□□□□ -1.8
YNL040WP53960 PRM2YIL037C 1971 nt3.8□□□□□ -1.8
YNL040WP53960 SOF1YLL011W 1470 nt3.79□□□□□ -1.8
YNL040WP53960 SRB5YGR104C 924 nt3.79□□□□□ -1.8
YNL040WP53960 MTM1YGR257C 1101 nt3.79□□□□□ -1.8
YNL040WP53960 GVP36YIL041W 981 nt3.79□□□□□ -1.8
YNL040WP53960 DPH1YIL103W 1278 nt3.79□□□□□ -1.8
YNL040WP53960 NCE102YPR149W 522 nt3.79□□□□□ -1.8
YNL040WP53960 RPS9BYBR189W 588 nt3.79□□□□□ -1.8
YNL040WP53960 SRS2YJL092W 3525 nt3.78□□□□□ -1.8
YNL040WP53960 SAE3YHR079C-A 276 nt3.78□□□□□ -1.8
YNL040WP53960 YKR047WYKR047W 306 nt3.78□□□□□ -1.8
YNL040WP53960 RPO21YDL140C 5202 nt3.78□□□□□ -1.8
YNL040WP53960 VPS45YGL095C 1734 nt3.78□□□□□ -1.8
YNL040WP53960 TCM62YBR044C 1719 nt3.78□□□□□ -1.8
YNL040WP53960 CTF18YMR078C 2226 nt3.78□□□□□ -1.8
YNL040WP53960 NAM2YLR382C 2685 nt3.77□□□□□ -1.81
YNL040WP53960 ASI1YMR119W 1875 nt3.77□□□□□ -1.81
YNL040WP53960 ARX1YDR101C 1782 nt3.77□□□□□ -1.81
YNL040WP53960 KRI1YNL308C 1776 nt3.77□□□□□ -1.81
YNL040WP53960 CDC6YJL194W 1542 nt3.77□□□□□ -1.81
YNL040WP53960 YML020WYML020W 1995 nt3.77□□□□□ -1.81
YNL040WP53960 TRX3YCR083W 384 nt3.77□□□□□ -1.81
YNL040WP53960 MRPL11YDL202W 750 nt3.77□□□□□ -1.81
YNL040WP53960 NSE1YLR007W 1011 nt3.77□□□□□ -1.81
YNL040WP53960 YLR049CYLR049C 1287 nt3.77□□□□□ -1.81
YNL040WP53960 YLR156WYLR156W 345 nt3.77□□□□□ -1.81
YNL040WP53960 YLR159WYLR159W 345 nt3.77□□□□□ -1.81
YNL040WP53960 YLR161WYLR161W 345 nt3.77□□□□□ -1.81
YNL040WP53960 ELO3YLR372W 1038 nt3.77□□□□□ -1.81
YNL040WP53960 ALA1YOR335C 2877 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms