Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A1P53007 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC25A1P53007 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A1P53007 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SLC25A1P53007 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A1P53007 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC25A1P53007 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC25A1P53007 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A1P53007 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC25A1P53007 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC25A1P53007 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
SLC25A1P53007 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.56■□□□□ 0.72
SLC25A1P53007 AC010997.5-201ENST00000609182 354 ntBASIC19.56■□□□□ 0.72
SLC25A1P53007 CA15P2-201ENST00000611168 834 ntBASIC19.56■□□□□ 0.72
SLC25A1P53007 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SLC25A1P53007 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A1P53007 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC25A1P53007 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC25A1P53007 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A1P53007 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC25A1P53007 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC25A1P53007 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC25A1P53007 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A1P53007 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC25A1P53007 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC25A1P53007 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A1P53007 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC25A1P53007 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A1P53007 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC25A1P53007 AC004687.1-201ENST00000579003 1625 ntBASIC19.54■□□□□ 0.72
SLC25A1P53007 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC25A1P53007 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC25A1P53007 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC25A1P53007 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A1P53007 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A1P53007 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A1P53007 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SLC25A1P53007 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A1P53007 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC25A1P53007 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC25A1P53007 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC25A1P53007 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC25A1P53007 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC25A1P53007 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC25A1P53007 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC25A1P53007 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC25A1P53007 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC25A1P53007 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC25A1P53007 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC25A1P53007 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC25A1P53007 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 AC239859.2-201ENST00000444165 318 ntBASIC19.52■□□□□ 0.72
SLC25A1P53007 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC25A1P53007 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC25A1P53007 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC25A1P53007 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC25A1P53007 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC25A1P53007 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC25A1P53007 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC25A1P53007 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC25A1P53007 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
SLC25A1P53007 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SLC25A1P53007 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC25A1P53007 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC25A1P53007 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC25A1P53007 RARRES2P1-201ENST00000474487 481 ntBASIC19.5■□□□□ 0.71
SLC25A1P53007 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC25A1P53007 AL499627.2-201ENST00000606283 725 ntBASIC19.5■□□□□ 0.71
SLC25A1P53007 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC25A1P53007 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SLC25A1P53007 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms