Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.2■□□□□ 0.82
SSR4P51571 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.2■□□□□ 0.82
SSR4P51571 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SSR4P51571 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.2■□□□□ 0.82
SSR4P51571 MIR6821-201ENST00000617625 74 ntBASIC20.2■□□□□ 0.82
SSR4P51571 AL031602.1-201ENST00000633169 911 ntBASIC20.2■□□□□ 0.82
SSR4P51571 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR4P51571 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR4P51571 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR4P51571 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR4P51571 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SSR4P51571 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SSR4P51571 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
SSR4P51571 AC012414.1-201ENST00000556676 535 ntBASIC20.19■□□□□ 0.82
SSR4P51571 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 AL354811.1-201ENST00000610286 706 ntBASIC20.19■□□□□ 0.82
SSR4P51571 MIR5787-201ENST00000611784 55 ntBASIC20.19■□□□□ 0.82
SSR4P51571 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.19■□□□□ 0.82
SSR4P51571 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR4P51571 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSR4P51571 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR4P51571 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR4P51571 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.18■□□□□ 0.82
SSR4P51571 AC010141.3-201ENST00000456659 717 ntBASIC20.18■□□□□ 0.82
SSR4P51571 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.18■□□□□ 0.82
SSR4P51571 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.18■□□□□ 0.82
SSR4P51571 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR4P51571 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 DUSP8P3-201ENST00000399571 1760 ntBASIC20.18■□□□□ 0.82
SSR4P51571 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR4P51571 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SSR4P51571 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR4P51571 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR4P51571 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SSR4P51571 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.17■□□□□ 0.82
SSR4P51571 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.17■□□□□ 0.82
SSR4P51571 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.17■□□□□ 0.82
SSR4P51571 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.17■□□□□ 0.82
SSR4P51571 AC105233.4-201ENST00000642045 216 ntBASIC20.17■□□□□ 0.82
SSR4P51571 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR4P51571 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR4P51571 MIR6084-201ENST00000622012 110 ntBASIC20.16■□□□□ 0.82
SSR4P51571 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR4P51571 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.16■□□□□ 0.82
SSR4P51571 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR4P51571 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR4P51571 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SSR4P51571 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.15■□□□□ 0.82
SSR4P51571 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR4P51571 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR4P51571 YBX1P1-201ENST00000445822 960 ntBASIC20.15■□□□□ 0.82
SSR4P51571 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR4P51571 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.15■□□□□ 0.82
SSR4P51571 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR4P51571 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SSR4P51571 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSR4P51571 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.15■□□□□ 0.82
SSR4P51571 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR4P51571 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR4P51571 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR4P51571 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SSR4P51571 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SSR4P51571 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SSR4P51571 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR4P51571 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR4P51571 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR4P51571 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR4P51571 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.14■□□□□ 0.81
SSR4P51571 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms