Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YAR030CYAR030C 342 nt3.58□□□□□ -1.84
CDC40P40968 SUA7YPR086W 1038 nt3.58□□□□□ -1.84
CDC40P40968 YKL050CYKL050C 2769 nt3.58□□□□□ -1.84
CDC40P40968 PRP3YDR473C 1410 nt3.58□□□□□ -1.84
CDC40P40968 FAR10YLR238W 1437 nt3.58□□□□□ -1.84
CDC40P40968 JEM1YJL073W 1938 nt3.58□□□□□ -1.84
CDC40P40968 KRE5YOR336W 4098 nt3.57□□□□□ -1.84
CDC40P40968 YGL101WYGL101W 648 nt3.57□□□□□ -1.84
CDC40P40968 YGR219WYGR219W 342 nt3.57□□□□□ -1.84
CDC40P40968 ERV29YGR284C 933 nt3.57□□□□□ -1.84
CDC40P40968 RRP3YHR065C 1506 nt3.57□□□□□ -1.84
CDC40P40968 YUH1YJR099W 711 nt3.57□□□□□ -1.84
CDC40P40968 CPA2YJR109C 3357 nt3.57□□□□□ -1.84
CDC40P40968 IOC2YLR095C 2439 nt3.57□□□□□ -1.84
CDC40P40968 YNL217WYNL217W 981 nt3.57□□□□□ -1.84
CDC40P40968 HRT1YOL133W 366 nt3.57□□□□□ -1.84
CDC40P40968 YPR059CYPR059C 387 nt3.57□□□□□ -1.84
CDC40P40968 RNR1YER070W 2667 nt3.56□□□□□ -1.84
CDC40P40968 BNA6YFR047C 888 nt3.56□□□□□ -1.84
CDC40P40968 MF(ALPHA)2YGL089C 363 nt3.56□□□□□ -1.84
CDC40P40968 PUS6YGR169C 1215 nt3.56□□□□□ -1.84
CDC40P40968 COX2Q0250 756 nt3.56□□□□□ -1.84
CDC40P40968 TAF4YMR005W 1167 nt3.56□□□□□ -1.84
CDC40P40968 YMR084WYMR084W 789 nt3.56□□□□□ -1.84
CDC40P40968 CKB2YOR039W 777 nt3.56□□□□□ -1.84
CDC40P40968 TAF14YPL129W 735 nt3.56□□□□□ -1.84
CDC40P40968 OPY1YBR129C 987 nt3.56□□□□□ -1.84
CDC40P40968 POF1YCL047C 777 nt3.56□□□□□ -1.84
CDC40P40968 TAF6YGL112C 1551 nt3.55□□□□□ -1.84
CDC40P40968 IMD2YHR216W 1572 nt3.55□□□□□ -1.84
CDC40P40968 RRN7YJL025W 1545 nt3.55□□□□□ -1.84
CDC40P40968 SLM5YCR024C 1479 nt3.55□□□□□ -1.84
CDC40P40968 YVC1YOR087W 2028 nt3.55□□□□□ -1.84
CDC40P40968 PAF1YBR279W 1338 nt3.55□□□□□ -1.84
CDC40P40968 MNN10YDR245W 1182 nt3.55□□□□□ -1.84
CDC40P40968 RPL43BYJR094W-A 279 nt3.55□□□□□ -1.84
CDC40P40968 NMD4YLR363C 657 nt3.55□□□□□ -1.84
CDC40P40968 MCK1YNL307C 1128 nt3.55□□□□□ -1.84
CDC40P40968 TMC1YOR052C 453 nt3.55□□□□□ -1.84
CDC40P40968 YOR338WYOR338W 1092 nt3.55□□□□□ -1.84
CDC40P40968 MCM16YPR046W 546 nt3.55□□□□□ -1.84
CDC40P40968 VID27YNL212W 2349 nt3.55□□□□□ -1.84
CDC40P40968 MEF1YLR069C 2286 nt3.55□□□□□ -1.84
CDC40P40968 DHR2YKL078W 2208 nt3.55□□□□□ -1.84
CDC40P40968 EMP47YFL048C 1338 nt3.54□□□□□ -1.84
CDC40P40968 FAU1YER183C 636 nt3.54□□□□□ -1.84
CDC40P40968 RPN12YFR052W 825 nt3.54□□□□□ -1.84
CDC40P40968 BUD13YGL174W 801 nt3.54□□□□□ -1.84
CDC40P40968 YNL144W-AYNL144W-A 84 nt3.54□□□□□ -1.84
CDC40P40968 DDP1YOR163W 567 nt3.54□□□□□ -1.84
CDC40P40968 TMA16YOR252W 537 nt3.54□□□□□ -1.84
CDC40P40968 YBR141W-AYBR141W-A 96 nt3.54□□□□□ -1.84
CDC40P40968 YEH2YLR020C 1617 nt3.54□□□□□ -1.84
CDC40P40968 CTK1YKL139W 1587 nt3.54□□□□□ -1.84
CDC40P40968 RAD30YDR419W 1899 nt3.54□□□□□ -1.84
CDC40P40968 MSA1YOR066W 1890 nt3.54□□□□□ -1.84
CDC40P40968 OAF3YKR064W 2592 nt3.54□□□□□ -1.84
CDC40P40968 HSP42YDR171W 1128 nt3.53□□□□□ -1.84
CDC40P40968 HAT2YEL056W 1206 nt3.53□□□□□ -1.84
CDC40P40968 LDB18YLL049W 540 nt3.53□□□□□ -1.84
CDC40P40968 HEK2YBL032W 1146 nt3.53□□□□□ -1.84
CDC40P40968 SPC24YMR117C 642 nt3.53□□□□□ -1.84
CDC40P40968 SSO2YMR183C 888 nt3.53□□□□□ -1.84
CDC40P40968 SLZ1YNL196C 897 nt3.53□□□□□ -1.84
CDC40P40968 CUE5YOR042W 1236 nt3.53□□□□□ -1.84
CDC40P40968 SER1YOR184W 1188 nt3.53□□□□□ -1.84
CDC40P40968 UAF30YOR295W 687 nt3.53□□□□□ -1.84
CDC40P40968 SSO1YPL232W 873 nt3.53□□□□□ -1.84
CDC40P40968 DBP3YGL078C 1572 nt3.53□□□□□ -1.84
CDC40P40968 GRS2YPR081C 1857 nt3.53□□□□□ -1.84
CDC40P40968 ISM1YPL040C 3009 nt3.53□□□□□ -1.84
CDC40P40968 SSH1YBR283C 1473 nt3.53□□□□□ -1.84
CDC40P40968 SER3YER081W 1410 nt3.53□□□□□ -1.85
CDC40P40968 YGR117CYGR117C 1431 nt3.53□□□□□ -1.85
CDC40P40968 YFL040WYFL040W 1623 nt3.52□□□□□ -1.85
CDC40P40968 ERB1YMR049C 2424 nt3.52□□□□□ -1.85
CDC40P40968 PTC1YDL006W 846 nt3.52□□□□□ -1.85
CDC40P40968 MSS2YDL107W 1056 nt3.52□□□□□ -1.85
CDC40P40968 IRC6YFR043C 714 nt3.52□□□□□ -1.85
CDC40P40968 RNA15YGL044C 891 nt3.52□□□□□ -1.85
CDC40P40968 YGR204C-AYGR204C-A 114 nt3.52□□□□□ -1.85
CDC40P40968 SOL4YGR248W 768 nt3.52□□□□□ -1.85
CDC40P40968 BET1YIL004C 429 nt3.52□□□□□ -1.85
CDC40P40968 YAL044W-AYAL044W-A 333 nt3.52□□□□□ -1.85
CDC40P40968 MTR2YKL186C 555 nt3.52□□□□□ -1.85
CDC40P40968 BUD28YLR062C 378 nt3.52□□□□□ -1.85
CDC40P40968 CTR1YPR124W 1221 nt3.52□□□□□ -1.85
CDC40P40968 DSN1YIR010W 1731 nt3.52□□□□□ -1.85
CDC40P40968 TRE2YOR256C 2430 nt3.52□□□□□ -1.85
CDC40P40968 ABD1YBR236C 1311 nt3.51□□□□□ -1.85
CDC40P40968 AGA1YNR044W 2178 nt3.51□□□□□ -1.85
CDC40P40968 TMA108YIL137C 2841 nt3.51□□□□□ -1.85
CDC40P40968 EPO1YMR124W 2832 nt3.51□□□□□ -1.85
CDC40P40968 DUO1YGL061C 744 nt3.51□□□□□ -1.85
CDC40P40968 YHR069C-AYHR069C-A 363 nt3.51□□□□□ -1.85
CDC40P40968 TOM5YPR133W-A 153 nt3.51□□□□□ -1.85
CDC40P40968 PWR1PWR1 941 nt3.51□□□□□ -1.85
CDC40P40968 DAP2YHR028C 2457 nt3.51□□□□□ -1.85
CDC40P40968 RAD52YML032C 1416 nt3.51□□□□□ -1.85
CDC40P40968 ATG2YNL242W 4779 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms