Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 HUT1YPL244C 1020 nt5.84□□□□□ -1.47
MSH4P40965 FEX2YPL279C 1128 nt5.84□□□□□ -1.47
MSH4P40965 YIL001WYIL001W 1542 nt5.84□□□□□ -1.48
MSH4P40965 TAF8YML114C 1533 nt5.84□□□□□ -1.48
MSH4P40965 STE20YHL007C 2820 nt5.84□□□□□ -1.48
MSH4P40965 PRP43YGL120C 2304 nt5.83□□□□□ -1.48
MSH4P40965 BUD8YLR353W 1812 nt5.83□□□□□ -1.48
MSH4P40965 MGA1YGR249W 1371 nt5.83□□□□□ -1.48
MSH4P40965 PST1YDR055W 1335 nt5.83□□□□□ -1.48
MSH4P40965 YCR015CYCR015C 954 nt5.83□□□□□ -1.48
MSH4P40965 snR7-LsnR7-L 214 nt5.83□□□□□ -1.48
MSH4P40965 PDS1YDR113C 1122 nt5.83□□□□□ -1.48
MSH4P40965 TLG1YDR468C 675 nt5.83□□□□□ -1.48
MSH4P40965 YGR226CYGR226C 210 nt5.83□□□□□ -1.48
MSH4P40965 PEX18YHR160C 852 nt5.83□□□□□ -1.48
MSH4P40965 YIM1YMR152W 1098 nt5.83□□□□□ -1.48
MSH4P40965 YNL320WYNL320W 855 nt5.83□□□□□ -1.48
MSH4P40965 RCL1YOL010W 1104 nt5.83□□□□□ -1.48
MSH4P40965 snR10snR10 245 nt5.83□□□□□ -1.48
MSH4P40965 YOL150CYOL150C 312 nt5.83□□□□□ -1.48
MSH4P40965 GAL7YBR018C 1101 nt5.83□□□□□ -1.48
MSH4P40965 YPL199CYPL199C 723 nt5.83□□□□□ -1.48
MSH4P40965 YBR116CYBR116C 528 nt5.83□□□□□ -1.48
MSH4P40965 SAG1YJR004C 1953 nt5.83□□□□□ -1.48
MSH4P40965 APM2YHL019C 1818 nt5.83□□□□□ -1.48
MSH4P40965 SUP45YBR143C 1314 nt5.82□□□□□ -1.48
MSH4P40965 BI3Q0115 1554 nt5.82□□□□□ -1.48
MSH4P40965 EMC4YGL231C 573 nt5.82□□□□□ -1.48
MSH4P40965 NAG1YGR031C-A 492 nt5.82□□□□□ -1.48
MSH4P40965 PTI1YGR156W 1278 nt5.82□□□□□ -1.48
MSH4P40965 PUS6YGR169C 1215 nt5.82□□□□□ -1.48
MSH4P40965 RTA1YGR213C 954 nt5.82□□□□□ -1.48
MSH4P40965 VPS71YML041C 843 nt5.82□□□□□ -1.48
MSH4P40965 PLP2YOR281C 861 nt5.82□□□□□ -1.48
MSH4P40965 YPR145C-AYPR145C-A 237 nt5.82□□□□□ -1.48
MSH4P40965 YMR1YJR110W 2067 nt5.82□□□□□ -1.48
MSH4P40965 REF2YDR195W 1602 nt5.81□□□□□ -1.48
MSH4P40965 SIF2YBR103W 1608 nt5.81□□□□□ -1.48
MSH4P40965 NSE4YDL105W 1209 nt5.81□□□□□ -1.48
MSH4P40965 ERD1YDR414C 1089 nt5.81□□□□□ -1.48
MSH4P40965 YJR157WYJR157W 363 nt5.81□□□□□ -1.48
MSH4P40965 TEM1YML064C 738 nt5.81□□□□□ -1.48
MSH4P40965 SEC14YMR079W 915 nt5.81□□□□□ -1.48
MSH4P40965 YMR085WYMR085W 1299 nt5.81□□□□□ -1.48
MSH4P40965 IRC13YOR235W 315 nt5.81□□□□□ -1.48
MSH4P40965 YBR126W-AYBR126W-A 207 nt5.81□□□□□ -1.48
MSH4P40965 MKS1YNL076W 1755 nt5.8□□□□□ -1.48
MSH4P40965 JEM1YJL073W 1938 nt5.8□□□□□ -1.48
MSH4P40965 RVS161YCR009C 798 nt5.8□□□□□ -1.48
MSH4P40965 SPR28YDR218C 1272 nt5.8□□□□□ -1.48
MSH4P40965 MF(ALPHA)2YGL089C 363 nt5.8□□□□□ -1.48
MSH4P40965 YOR238WYOR238W 912 nt5.8□□□□□ -1.48
MSH4P40965 MGR2YPL098C 342 nt5.8□□□□□ -1.48
MSH4P40965 YGR125WYGR125W 3111 nt5.8□□□□□ -1.48
MSH4P40965 SNF3YDL194W 2655 nt5.8□□□□□ -1.48
MSH4P40965 YJR061WYJR061W 2808 nt5.8□□□□□ -1.48
MSH4P40965 HES1YOR237W 1305 nt5.79□□□□□ -1.48
MSH4P40965 CTS1YLR286C 1689 nt5.79□□□□□ -1.48
MSH4P40965 RPL22BYFL034C-A 369 nt5.79□□□□□ -1.48
MSH4P40965 AAD10YJR155W 867 nt5.79□□□□□ -1.48
MSH4P40965 GCD7YLR291C 1146 nt5.79□□□□□ -1.48
MSH4P40965 RIF2YLR453C 1188 nt5.79□□□□□ -1.48
MSH4P40965 CSI2YOL007C 1026 nt5.79□□□□□ -1.48
MSH4P40965 YBR071WYBR071W 636 nt5.79□□□□□ -1.48
MSH4P40965 APL6YGR261C 2430 nt5.78□□□□□ -1.48
MSH4P40965 PSY4YBL046W 1326 nt5.78□□□□□ -1.48
MSH4P40965 SCM3YDL139C 672 nt5.78□□□□□ -1.48
MSH4P40965 YDR056CYDR056C 618 nt5.78□□□□□ -1.48
MSH4P40965 TRM1YDR120C 1713 nt5.78□□□□□ -1.48
MSH4P40965 SER3YER081W 1410 nt5.78□□□□□ -1.48
MSH4P40965 COX6YHR051W 447 nt5.78□□□□□ -1.48
MSH4P40965 SER33YIL074C 1410 nt5.78□□□□□ -1.48
MSH4P40965 SDS3YIL084C 984 nt5.78□□□□□ -1.48
MSH4P40965 YLR346CYLR346C 306 nt5.78□□□□□ -1.48
MSH4P40965 YLR462WYLR462W 609 nt5.78□□□□□ -1.48
MSH4P40965 YMR082CYMR082C 357 nt5.78□□□□□ -1.48
MSH4P40965 AIM36YMR157C 768 nt5.78□□□□□ -1.48
MSH4P40965 SOL1YNR034W 966 nt5.78□□□□□ -1.48
MSH4P40965 YOR114WYOR114W 885 nt5.78□□□□□ -1.48
MSH4P40965 YOR338WYOR338W 1092 nt5.78□□□□□ -1.48
MSH4P40965 snR44snR44 211 nt5.78□□□□□ -1.48
MSH4P40965 YCL007CYCL007C 393 nt5.78□□□□□ -1.48
MSH4P40965 ADE4YMR300C 1533 nt5.78□□□□□ -1.48
MSH4P40965 TYR1YBR166C 1359 nt5.78□□□□□ -1.48
MSH4P40965 TDA7YNL176C 1911 nt5.78□□□□□ -1.48
MSH4P40965 SAP155YFR040W 3009 nt5.77□□□□□ -1.49
MSH4P40965 YDL027CYDL027C 1263 nt5.77□□□□□ -1.49
MSH4P40965 TEF4YKL081W 1239 nt5.77□□□□□ -1.49
MSH4P40965 MIC27YNL100W 705 nt5.77□□□□□ -1.49
MSH4P40965 BUD17YNR027W 954 nt5.77□□□□□ -1.49
MSH4P40965 TYE7YOR344C 876 nt5.77□□□□□ -1.49
MSH4P40965 CMR3YPR013C 954 nt5.77□□□□□ -1.49
MSH4P40965 NHP6AYPR052C 282 nt5.77□□□□□ -1.49
MSH4P40965 MDL1YLR188W 2088 nt5.77□□□□□ -1.49
MSH4P40965 STR2YJR130C 1920 nt5.77□□□□□ -1.49
MSH4P40965 CLF1YLR117C 2064 nt5.76□□□□□ -1.49
MSH4P40965 TRM13YOL125W 1431 nt5.76□□□□□ -1.49
MSH4P40965 PAL1YDR348C 1500 nt5.76□□□□□ -1.49
MSH4P40965 KIN28YDL108W 921 nt5.76□□□□□ -1.49
MSH4P40965 OCA6YDR067C 675 nt5.76□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms