Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX6P35712 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SOX6P35712 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
SOX6P35712 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.66■□□□□ 0.74
SOX6P35712 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SOX6P35712 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX6P35712 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SOX6P35712 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SOX6P35712 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.65■□□□□ 0.74
SOX6P35712 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SOX6P35712 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOX6P35712 AC005229.4-201ENST00000610085 2198 ntBASIC19.65■□□□□ 0.74
SOX6P35712 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SOX6P35712 AL022069.1-201ENST00000568025 1636 ntBASIC19.65■□□□□ 0.74
SOX6P35712 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX6P35712 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX6P35712 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SOX6P35712 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SOX6P35712 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SOX6P35712 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SOX6P35712 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SOX6P35712 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX6P35712 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.64■□□□□ 0.73
SOX6P35712 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX6P35712 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX6P35712 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SOX6P35712 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SOX6P35712 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX6P35712 AC060814.1-201ENST00000554326 538 ntBASIC19.63■□□□□ 0.73
SOX6P35712 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX6P35712 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX6P35712 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SOX6P35712 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX6P35712 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 AC090877.2-201ENST00000558441 1738 ntBASIC19.62■□□□□ 0.73
SOX6P35712 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SOX6P35712 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 GPX1-201ENST00000419349 1106 ntBASIC19.62■□□□□ 0.73
SOX6P35712 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX6P35712 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX6P35712 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX6P35712 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX6P35712 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX6P35712 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX6P35712 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SOX6P35712 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX6P35712 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX6P35712 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX6P35712 AC010542.4-201ENST00000563151 1910 ntBASIC19.61■□□□□ 0.73
SOX6P35712 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX6P35712 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX6P35712 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX6P35712 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX6P35712 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX6P35712 ALDH1A3-203ENST00000557963 1670 ntBASIC19.61■□□□□ 0.73
SOX6P35712 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX6P35712 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms