Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RORAP35398 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.88■□□□□ 0.93
RORAP35398 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
RORAP35398 AC034268.1-201ENST00000441047 882 ntBASIC20.88■□□□□ 0.93
RORAP35398 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.88■□□□□ 0.93
RORAP35398 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RORAP35398 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RORAP35398 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RORAP35398 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RORAP35398 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.87■□□□□ 0.93
RORAP35398 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RORAP35398 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RORAP35398 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RORAP35398 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RORAP35398 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.87■□□□□ 0.93
RORAP35398 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.87■□□□□ 0.93
RORAP35398 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.87■□□□□ 0.93
RORAP35398 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RORAP35398 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.87■□□□□ 0.93
RORAP35398 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RORAP35398 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
RORAP35398 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RORAP35398 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RORAP35398 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.86■□□□□ 0.93
RORAP35398 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RORAP35398 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.86■□□□□ 0.93
RORAP35398 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.86■□□□□ 0.93
RORAP35398 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.86■□□□□ 0.93
RORAP35398 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.86■□□□□ 0.93
RORAP35398 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RORAP35398 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RORAP35398 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
RORAP35398 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.85■□□□□ 0.93
RORAP35398 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RORAP35398 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RORAP35398 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
RORAP35398 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.85■□□□□ 0.93
RORAP35398 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.85■□□□□ 0.93
RORAP35398 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RORAP35398 ANOS2P-203ENST00000472227 1816 ntBASIC20.85■□□□□ 0.93
RORAP35398 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
RORAP35398 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RORAP35398 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.84■□□□□ 0.93
RORAP35398 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RORAP35398 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RORAP35398 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.84■□□□□ 0.93
RORAP35398 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.84■□□□□ 0.93
RORAP35398 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.84■□□□□ 0.93
RORAP35398 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.84■□□□□ 0.93
RORAP35398 DUX4L2-201ENST00000561772 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
RORAP35398 DUX4L6-201ENST00000626483 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4L1-201ENST00000627662 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4L8-201ENST00000629013 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4L3-201ENST00000630187 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4L7-201ENST00000630678 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 DUX4L5-201ENST00000630834 1275 ntBASIC20.84■□□□□ 0.93
RORAP35398 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RORAP35398 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.84■□□□□ 0.93
RORAP35398 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RORAP35398 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RORAP35398 AC092068.2-201ENST00000590491 1708 ntBASIC20.84■□□□□ 0.93
RORAP35398 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RORAP35398 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RORAP35398 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RORAP35398 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RORAP35398 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.83■□□□□ 0.93
RORAP35398 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RORAP35398 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.83■□□□□ 0.93
RORAP35398 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.83■□□□□ 0.93
RORAP35398 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.83■□□□□ 0.93
RORAP35398 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RORAP35398 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.83■□□□□ 0.92
RORAP35398 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RORAP35398 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
RORAP35398 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RORAP35398 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.83■□□□□ 0.92
RORAP35398 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.82■□□□□ 0.92
RORAP35398 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.82■□□□□ 0.92
RORAP35398 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
RORAP35398 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.82■□□□□ 0.92
RORAP35398 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.82■□□□□ 0.92
RORAP35398 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RORAP35398 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RORAP35398 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RORAP35398 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.81■□□□□ 0.92
RORAP35398 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RORAP35398 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RORAP35398 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RORAP35398 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
RORAP35398 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RORAP35398 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms