Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YAE1YJR067C 426 nt4.77□□□□□ -1.65
MSH1P25846 MMM1YLL006W 1281 nt4.77□□□□□ -1.65
MSH1P25846 DCS1YLR270W 1053 nt4.77□□□□□ -1.65
MSH1P25846 ATG33YLR356W 594 nt4.77□□□□□ -1.65
MSH1P25846 POP8YBL018C 402 nt4.77□□□□□ -1.65
MSH1P25846 YOL118CYOL118C 309 nt4.77□□□□□ -1.65
MSH1P25846 THS1YIL078W 2205 nt4.77□□□□□ -1.65
MSH1P25846 SSB1YDL229W 1842 nt4.76□□□□□ -1.65
MSH1P25846 snR7-LsnR7-L 214 nt4.76□□□□□ -1.65
MSH1P25846 MSC2YDR205W 2175 nt4.76□□□□□ -1.65
MSH1P25846 YND1YER005W 1893 nt4.76□□□□□ -1.65
MSH1P25846 FMP33YJL161W 543 nt4.76□□□□□ -1.65
MSH1P25846 ECM15YBL001C 315 nt4.76□□□□□ -1.65
MSH1P25846 MRPS17YMR188C 714 nt4.76□□□□□ -1.65
MSH1P25846 YOR314WYOR314W 330 nt4.76□□□□□ -1.65
MSH1P25846 TRS85YDR108W 2097 nt4.76□□□□□ -1.65
MSH1P25846 TRF5YNL299W 1929 nt4.76□□□□□ -1.65
MSH1P25846 BBC1YJL020C 3474 nt4.76□□□□□ -1.65
MSH1P25846 TEC1YBR083W 1461 nt4.75□□□□□ -1.65
MSH1P25846 RPG1YBR079C 2895 nt4.75□□□□□ -1.65
MSH1P25846 IMD2YHR216W 1572 nt4.75□□□□□ -1.65
MSH1P25846 DBP5YOR046C 1449 nt4.75□□□□□ -1.65
MSH1P25846 GIC2YDR309C 1152 nt4.75□□□□□ -1.65
MSH1P25846 BCP1YDR361C 852 nt4.75□□□□□ -1.65
MSH1P25846 SNA2YDR525W-A 240 nt4.75□□□□□ -1.65
MSH1P25846 RNA15YGL044C 891 nt4.75□□□□□ -1.65
MSH1P25846 HOT13YKL084W 351 nt4.75□□□□□ -1.65
MSH1P25846 YNL171CYNL171C 369 nt4.75□□□□□ -1.65
MSH1P25846 MCK1YNL307C 1128 nt4.75□□□□□ -1.65
MSH1P25846 FEX1YOR390W 1128 nt4.75□□□□□ -1.65
MSH1P25846 FEX2YPL279C 1128 nt4.75□□□□□ -1.65
MSH1P25846 YLR345WYLR345W 1530 nt4.75□□□□□ -1.65
MSH1P25846 VAC7YNL054W 3498 nt4.74□□□□□ -1.65
MSH1P25846 APP1YNL094W 1764 nt4.74□□□□□ -1.65
MSH1P25846 YCR024C-BYCR024C-B 267 nt4.74□□□□□ -1.65
MSH1P25846 YDL124WYDL124W 939 nt4.74□□□□□ -1.65
MSH1P25846 YEL053W-AYEL053W-A 348 nt4.74□□□□□ -1.65
MSH1P25846 PRE9YGR135W 777 nt4.74□□□□□ -1.65
MSH1P25846 Q0144Q0144 330 nt4.74□□□□□ -1.65
MSH1P25846 SAW1YAL027W 786 nt4.74□□□□□ -1.65
MSH1P25846 YUH1YJR099W 711 nt4.74□□□□□ -1.65
MSH1P25846 HYM1YKL189W 1200 nt4.74□□□□□ -1.65
MSH1P25846 USB1YLR132C 873 nt4.74□□□□□ -1.65
MSH1P25846 IZH4YOL101C 939 nt4.74□□□□□ -1.65
MSH1P25846 YOR114WYOR114W 885 nt4.74□□□□□ -1.65
MSH1P25846 YPL199CYPL199C 723 nt4.74□□□□□ -1.65
MSH1P25846 ALE1YOR175C 1860 nt4.74□□□□□ -1.65
MSH1P25846 OAF1YAL051W 3144 nt4.74□□□□□ -1.65
MSH1P25846 PRP9YDL030W 1593 nt4.74□□□□□ -1.65
MSH1P25846 PDR15YDR406W 4590 nt4.73□□□□□ -1.65
MSH1P25846 ARG82YDR173C 1068 nt4.73□□□□□ -1.65
MSH1P25846 tR(UCU)Q1tR(UCU)Q1 73 nt4.73□□□□□ -1.65
MSH1P25846 YJR071WYJR071W 369 nt4.73□□□□□ -1.65
MSH1P25846 ORM2YLR350W 651 nt4.73□□□□□ -1.65
MSH1P25846 URA4YLR420W 1095 nt4.73□□□□□ -1.65
MSH1P25846 YMR105W-AYMR105W-A 195 nt4.73□□□□□ -1.65
MSH1P25846 EAF7YNL136W 1278 nt4.73□□□□□ -1.65
MSH1P25846 YOR342CYOR342C 960 nt4.73□□□□□ -1.65
MSH1P25846 SAP4YGL229C 2457 nt4.73□□□□□ -1.65
MSH1P25846 SRO7YPR032W 3102 nt4.73□□□□□ -1.65
MSH1P25846 RTG3YBL103C 1461 nt4.73□□□□□ -1.65
MSH1P25846 CTK1YKL139W 1587 nt4.73□□□□□ -1.65
MSH1P25846 HPR1YDR138W 2259 nt4.72□□□□□ -1.65
MSH1P25846 RDI1YDL135C 609 nt4.72□□□□□ -1.65
MSH1P25846 SHR3YDL212W 633 nt4.72□□□□□ -1.65
MSH1P25846 SHU2YDR078C 672 nt4.72□□□□□ -1.65
MSH1P25846 YIL102C-AYIL102C-A 228 nt4.72□□□□□ -1.65
MSH1P25846 YMR130WYMR130W 909 nt4.72□□□□□ -1.65
MSH1P25846 YPL025CYPL025C 558 nt4.72□□□□□ -1.65
MSH1P25846 CSH1YBR161W 1131 nt4.72□□□□□ -1.65
MSH1P25846 SER3YER081W 1410 nt4.72□□□□□ -1.65
MSH1P25846 PUT1YLR142W 1431 nt4.72□□□□□ -1.65
MSH1P25846 MDM10YAL010C 1482 nt4.71□□□□□ -1.66
MSH1P25846 BUD13YGL174W 801 nt4.71□□□□□ -1.66
MSH1P25846 AIM23YJL131C 1071 nt4.71□□□□□ -1.66
MSH1P25846 RPF2YKR081C 1035 nt4.71□□□□□ -1.66
MSH1P25846 MRPL39YML009C 213 nt4.71□□□□□ -1.66
MSH1P25846 YOL162WYOL162W 648 nt4.71□□□□□ -1.66
MSH1P25846 INA17YPL099C 549 nt4.71□□□□□ -1.66
MSH1P25846 SPB4YFL002C 1821 nt4.71□□□□□ -1.66
MSH1P25846 PMC1YGL006W 3522 nt4.71□□□□□ -1.66
MSH1P25846 PFK1YGR240C 2964 nt4.71□□□□□ -1.66
MSH1P25846 PST1YDR055W 1335 nt4.71□□□□□ -1.66
MSH1P25846 BOI2YER114C 3123 nt4.7□□□□□ -1.66
MSH1P25846 NOC2YOR206W 2133 nt4.7□□□□□ -1.66
MSH1P25846 VHS3YOR054C 2025 nt4.7□□□□□ -1.66
MSH1P25846 AVT1YJR001W 1809 nt4.7□□□□□ -1.66
MSH1P25846 VMA1YDL185W 3216 nt4.7□□□□□ -1.66
MSH1P25846 YDL157CYDL157C 357 nt4.7□□□□□ -1.66
MSH1P25846 RPS11AYDR025W 471 nt4.7□□□□□ -1.66
MSH1P25846 BNA6YFR047C 888 nt4.7□□□□□ -1.66
MSH1P25846 MIC26YGR235C 702 nt4.7□□□□□ -1.66
MSH1P25846 YLR285C-AYLR285C-A 171 nt4.7□□□□□ -1.66
MSH1P25846 MRP2YPR166C 348 nt4.7□□□□□ -1.66
MSH1P25846 PRM1YNL279W 1986 nt4.7□□□□□ -1.66
MSH1P25846 PHO87YCR037C 2772 nt4.7□□□□□ -1.66
MSH1P25846 SSH1YBR283C 1473 nt4.69□□□□□ -1.66
MSH1P25846 YAP1802YGR241C 1707 nt4.69□□□□□ -1.66
MSH1P25846 YPK9YOR291W 4419 nt4.69□□□□□ -1.66
MSH1P25846 RSM26YJR101W 801 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms