Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H1DP16402 AC010980.1-201ENST00000587192 1142 ntBASIC18.63■□□□□ 0.57
HIST1H1DP16402 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1DP16402 FP325331.1-202ENST00000623531 1380 ntBASIC18.63■□□□□ 0.57
HIST1H1DP16402 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1DP16402 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1DP16402 AC026310.3-201ENST00000625186 2373 ntBASIC18.63■□□□□ 0.57
HIST1H1DP16402 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1DP16402 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HIST1H1DP16402 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1DP16402 AC010542.4-201ENST00000563151 1910 ntBASIC18.62■□□□□ 0.57
HIST1H1DP16402 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 AC004987.1-201ENST00000428627 508 ntBASIC18.62■□□□□ 0.57
HIST1H1DP16402 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1DP16402 FAM99A-202ENST00000538190 1989 ntBASIC18.62■□□□□ 0.57
HIST1H1DP16402 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H1DP16402 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HIST1H1DP16402 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1DP16402 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HIST1H1DP16402 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1DP16402 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1DP16402 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1DP16402 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1DP16402 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1DP16402 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1DP16402 MIR4508-201ENST00000584178 70 ntBASIC18.59■□□□□ 0.57
HIST1H1DP16402 AC009086.3-201ENST00000623486 1008 ntBASIC18.59■□□□□ 0.57
HIST1H1DP16402 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HIST1H1DP16402 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1DP16402 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1DP16402 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1DP16402 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H1DP16402 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.58■□□□□ 0.57
HIST1H1DP16402 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H1DP16402 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H1DP16402 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1DP16402 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST1H1DP16402 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST1H1DP16402 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HIST1H1DP16402 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1DP16402 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1DP16402 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1DP16402 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H1DP16402 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1DP16402 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms