Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ACANP16112 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ACANP16112 DUSP5P2-201ENST00000426873 1033 ntBASIC18.25■□□□□ 0.51
ACANP16112 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.25■□□□□ 0.51
ACANP16112 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.25■□□□□ 0.51
ACANP16112 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ACANP16112 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ACANP16112 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACANP16112 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACANP16112 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ACANP16112 AC133041.1-202ENST00000642053 222 ntBASIC18.24■□□□□ 0.51
ACANP16112 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ACANP16112 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 AC133552.2-202ENST00000575694 574 ntBASIC18.24■□□□□ 0.51
ACANP16112 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
ACANP16112 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACANP16112 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
ACANP16112 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.23■□□□□ 0.51
ACANP16112 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ACANP16112 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ACANP16112 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.23■□□□□ 0.51
ACANP16112 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.23■□□□□ 0.51
ACANP16112 FP325331.1-202ENST00000623531 1380 ntBASIC18.23■□□□□ 0.51
ACANP16112 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACANP16112 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ACANP16112 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ACANP16112 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.23■□□□□ 0.51
ACANP16112 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.23■□□□□ 0.51
ACANP16112 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ACANP16112 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.22■□□□□ 0.51
ACANP16112 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.22■□□□□ 0.51
ACANP16112 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.22■□□□□ 0.51
ACANP16112 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ACANP16112 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ACANP16112 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 AC104187.1-201ENST00000607510 612 ntBASIC18.22■□□□□ 0.51
ACANP16112 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.22■□□□□ 0.51
ACANP16112 AC092803.2-201ENST00000564287 1899 ntBASIC18.22■□□□□ 0.51
ACANP16112 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACANP16112 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ACANP16112 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ACANP16112 AC092118.2-201ENST00000613495 667 ntBASIC18.21■□□□□ 0.51
ACANP16112 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ACANP16112 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ACANP16112 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ACANP16112 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.21■□□□□ 0.51
ACANP16112 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.2■□□□□ 0.5
ACANP16112 AC105036.2-201ENST00000569468 176 ntBASIC18.2■□□□□ 0.5
ACANP16112 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.2■□□□□ 0.5
ACANP16112 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.2■□□□□ 0.5
ACANP16112 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.2■□□□□ 0.5
ACANP16112 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.2■□□□□ 0.5
ACANP16112 AC083880.1-201ENST00000608266 535 ntBASIC18.2■□□□□ 0.5
ACANP16112 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ACANP16112 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
ACANP16112 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ACANP16112 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ACANP16112 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ACANP16112 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.19■□□□□ 0.5
ACANP16112 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.19■□□□□ 0.5
ACANP16112 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.19■□□□□ 0.5
ACANP16112 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.19■□□□□ 0.5
ACANP16112 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ACANP16112 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.19■□□□□ 0.5
ACANP16112 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ACANP16112 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.19■□□□□ 0.5
ACANP16112 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms