Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL4P13236 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCL4P13236 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.94■□□□□ 0.94
CCL4P13236 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.94■□□□□ 0.94
CCL4P13236 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.94■□□□□ 0.94
CCL4P13236 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCL4P13236 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL4P13236 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL4P13236 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.94■□□□□ 0.94
CCL4P13236 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 AL139125.2-201ENST00000623134 1869 ntBASIC20.93■□□□□ 0.94
CCL4P13236 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.93■□□□□ 0.94
CCL4P13236 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCL4P13236 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.93■□□□□ 0.94
CCL4P13236 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.93■□□□□ 0.94
CCL4P13236 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.93■□□□□ 0.94
CCL4P13236 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCL4P13236 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL4P13236 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCL4P13236 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CCL4P13236 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.92■□□□□ 0.94
CCL4P13236 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 BX005040.4-201ENST00000637145 1518 ntBASIC20.92■□□□□ 0.94
CCL4P13236 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCL4P13236 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL4P13236 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL4P13236 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.91■□□□□ 0.94
CCL4P13236 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.91■□□□□ 0.94
CCL4P13236 AC006015.1-201ENST00000429970 570 ntBASIC20.91■□□□□ 0.94
CCL4P13236 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
CCL4P13236 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
CCL4P13236 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.91■□□□□ 0.94
CCL4P13236 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL4P13236 AC080038.1-201ENST00000611274 1154 ntBASIC20.91■□□□□ 0.94
CCL4P13236 AC068587.7-201ENST00000641602 218 ntBASIC20.91■□□□□ 0.94
CCL4P13236 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL4P13236 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.9■□□□□ 0.94
CCL4P13236 AP004607.4-201ENST00000530158 1459 ntBASIC20.9■□□□□ 0.94
CCL4P13236 AC004854.2-201ENST00000608450 1441 ntBASIC20.9■□□□□ 0.94
CCL4P13236 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL4P13236 AC016769.1-201ENST00000409132 1010 ntBASIC20.9■□□□□ 0.94
CCL4P13236 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCL4P13236 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCL4P13236 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
CCL4P13236 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.9■□□□□ 0.94
CCL4P13236 SMUG1P1-201ENST00000590640 811 ntBASIC20.9■□□□□ 0.94
CCL4P13236 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCL4P13236 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.9■□□□□ 0.94
CCL4P13236 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCL4P13236 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCL4P13236 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL4P13236 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL4P13236 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.89■□□□□ 0.93
CCL4P13236 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CCL4P13236 AC010141.3-201ENST00000456659 717 ntBASIC20.89■□□□□ 0.93
CCL4P13236 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.89■□□□□ 0.93
CCL4P13236 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.89■□□□□ 0.93
CCL4P13236 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCL4P13236 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL4P13236 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCL4P13236 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCL4P13236 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.88■□□□□ 0.93
CCL4P13236 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.88■□□□□ 0.93
CCL4P13236 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.88■□□□□ 0.93
CCL4P13236 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
CCL4P13236 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
CCL4P13236 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL4P13236 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCL4P13236 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCL4P13236 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCL4P13236 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms