Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
UBL4AP11441 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBL4AP11441 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBL4AP11441 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.25■□□□□ 0.83
UBL4AP11441 AC004687.1-201ENST00000579003 1625 ntBASIC20.25■□□□□ 0.83
UBL4AP11441 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.25■□□□□ 0.83
UBL4AP11441 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBL4AP11441 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.25■□□□□ 0.83
UBL4AP11441 AL499627.2-201ENST00000606283 725 ntBASIC20.25■□□□□ 0.83
UBL4AP11441 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.25■□□□□ 0.83
UBL4AP11441 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBL4AP11441 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBL4AP11441 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBL4AP11441 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.25■□□□□ 0.83
UBL4AP11441 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL4AP11441 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBL4AP11441 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.24■□□□□ 0.83
UBL4AP11441 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.24■□□□□ 0.83
UBL4AP11441 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.24■□□□□ 0.83
UBL4AP11441 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBL4AP11441 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.24■□□□□ 0.83
UBL4AP11441 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.24■□□□□ 0.83
UBL4AP11441 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBL4AP11441 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL4AP11441 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.24■□□□□ 0.83
UBL4AP11441 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL4AP11441 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBL4AP11441 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
UBL4AP11441 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBL4AP11441 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL4AP11441 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.23■□□□□ 0.83
UBL4AP11441 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.23■□□□□ 0.83
UBL4AP11441 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL4AP11441 pRNA.6-201ENST00000610482 90 ntBASIC20.23■□□□□ 0.83
UBL4AP11441 pRNA.5-201ENST00000612139 90 ntBASIC20.23■□□□□ 0.83
UBL4AP11441 pRNA.11-201ENST00000618423 90 ntBASIC20.23■□□□□ 0.83
UBL4AP11441 pRNA.13-201ENST00000619112 90 ntBASIC20.23■□□□□ 0.83
UBL4AP11441 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL4AP11441 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBL4AP11441 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL4AP11441 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
UBL4AP11441 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBL4AP11441 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.22■□□□□ 0.83
UBL4AP11441 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.22■□□□□ 0.83
UBL4AP11441 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.22■□□□□ 0.83
UBL4AP11441 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.22■□□□□ 0.83
UBL4AP11441 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBL4AP11441 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL4AP11441 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.21■□□□□ 0.83
UBL4AP11441 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.21■□□□□ 0.83
UBL4AP11441 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.21■□□□□ 0.83
UBL4AP11441 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UBL4AP11441 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
UBL4AP11441 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL4AP11441 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 AC233723.2-201ENST00000623798 2106 ntBASIC20.2■□□□□ 0.82
UBL4AP11441 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
UBL4AP11441 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL4AP11441 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
UBL4AP11441 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
UBL4AP11441 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms