Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM17P0DL12 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMIM17P0DL12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 RNF126P1-201ENST00000567452 1320 ntBASIC16.28■□□□□ 0.2
SMIM17P0DL12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MIR4449-201ENST00000578365 66 ntBASIC16.28■□□□□ 0.2
SMIM17P0DL12 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 ESRRAP2-201ENST00000418437 1549 ntBASIC16.28■□□□□ 0.2
SMIM17P0DL12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM17P0DL12 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM17P0DL12 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM17P0DL12 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMIM17P0DL12 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM17P0DL12 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM17P0DL12 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM17P0DL12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM17P0DL12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMIM17P0DL12 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM17P0DL12 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
SMIM17P0DL12 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
SMIM17P0DL12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM17P0DL12 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.27■□□□□ 0.19
SMIM17P0DL12 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM17P0DL12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM17P0DL12 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM17P0DL12 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM17P0DL12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM17P0DL12 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM17P0DL12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMIM17P0DL12 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMIM17P0DL12 AL137060.1-201ENST00000618151 2648 ntBASIC16.25■□□□□ 0.19
SMIM17P0DL12 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 AC242852.2-201ENST00000615738 1807 ntBASIC16.25■□□□□ 0.19
SMIM17P0DL12 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM17P0DL12 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM17P0DL12 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM17P0DL12 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM17P0DL12 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM17P0DL12 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.24■□□□□ 0.19
SMIM17P0DL12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM17P0DL12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM17P0DL12 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMIM17P0DL12 SPCS2P3-201ENST00000500401 656 ntBASIC16.24■□□□□ 0.19
SMIM17P0DL12 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms