Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.77■■□□□ 1.4
ITGB1P05556 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
ITGB1P05556 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ITGB1P05556 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.77■■□□□ 1.4
ITGB1P05556 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ITGB1P05556 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.77■■□□□ 1.4
ITGB1P05556 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
ITGB1P05556 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
ITGB1P05556 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ITGB1P05556 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.76■■□□□ 1.39
ITGB1P05556 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.76■■□□□ 1.39
ITGB1P05556 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.76■■□□□ 1.39
ITGB1P05556 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
ITGB1P05556 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ITGB1P05556 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
ITGB1P05556 RAP2CP1-201ENST00000605103 478 ntBASIC23.75■■□□□ 1.39
ITGB1P05556 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
ITGB1P05556 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.75■■□□□ 1.39
ITGB1P05556 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ITGB1P05556 AL353803.4-201ENST00000565882 1934 ntBASIC23.74■■□□□ 1.39
ITGB1P05556 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.74■■□□□ 1.39
ITGB1P05556 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.74■■□□□ 1.39
ITGB1P05556 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
ITGB1P05556 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.74■■□□□ 1.39
ITGB1P05556 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ITGB1P05556 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ITGB1P05556 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.73■■□□□ 1.39
ITGB1P05556 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
ITGB1P05556 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.73■■□□□ 1.39
ITGB1P05556 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.73■■□□□ 1.39
ITGB1P05556 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.73■■□□□ 1.39
ITGB1P05556 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 AC004687.1-201ENST00000579003 1625 ntBASIC23.73■■□□□ 1.39
ITGB1P05556 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ITGB1P05556 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.72■■□□□ 1.39
ITGB1P05556 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
ITGB1P05556 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.72■■□□□ 1.39
ITGB1P05556 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 CDCA4P2-201ENST00000441182 718 ntBASIC23.72■■□□□ 1.39
ITGB1P05556 AC137761.2-201ENST00000561729 223 ntBASIC23.72■■□□□ 1.39
ITGB1P05556 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.72■■□□□ 1.39
ITGB1P05556 AC145350.3-201ENST00000569033 163 ntBASIC23.72■■□□□ 1.39
ITGB1P05556 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.72■■□□□ 1.39
ITGB1P05556 TPRG1LP1-201ENST00000598702 760 ntBASIC23.72■■□□□ 1.39
ITGB1P05556 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
ITGB1P05556 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ITGB1P05556 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ITGB1P05556 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
ITGB1P05556 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.71■■□□□ 1.39
ITGB1P05556 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.71■■□□□ 1.39
ITGB1P05556 AC016769.1-201ENST00000409132 1010 ntBASIC23.71■■□□□ 1.39
ITGB1P05556 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.71■■□□□ 1.39
ITGB1P05556 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.71■■□□□ 1.39
ITGB1P05556 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.71■■□□□ 1.39
ITGB1P05556 AC073111.5-205ENST00000641717 521 ntBASIC23.71■■□□□ 1.39
ITGB1P05556 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ITGB1P05556 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
ITGB1P05556 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
ITGB1P05556 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
ITGB1P05556 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.7■■□□□ 1.38
ITGB1P05556 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.7■■□□□ 1.38
ITGB1P05556 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.7■■□□□ 1.38
ITGB1P05556 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.7■■□□□ 1.38
ITGB1P05556 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.7■■□□□ 1.38
ITGB1P05556 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.7■■□□□ 1.38
ITGB1P05556 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ITGB1P05556 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.7■■□□□ 1.38
ITGB1P05556 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.7■■□□□ 1.38
ITGB1P05556 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
ITGB1P05556 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ITGB1P05556 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ITGB1P05556 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.69■■□□□ 1.38
ITGB1P05556 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ITGB1P05556 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.69■■□□□ 1.38
ITGB1P05556 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ITGB1P05556 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ITGB1P05556 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.69■■□□□ 1.38
ITGB1P05556 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms