Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV3-11P04433 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
IGKV3-11P04433 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
IGKV3-11P04433 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.4■□□□□ 0.86
IGKV3-11P04433 AC068587.7-201ENST00000641602 218 ntBASIC20.4■□□□□ 0.86
IGKV3-11P04433 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV3-11P04433 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV3-11P04433 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV3-11P04433 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV3-11P04433 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.38■□□□□ 0.85
IGKV3-11P04433 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3-11P04433 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3-11P04433 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3-11P04433 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.38■□□□□ 0.85
IGKV3-11P04433 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.38■□□□□ 0.85
IGKV3-11P04433 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.38■□□□□ 0.85
IGKV3-11P04433 AC126544.1-201ENST00000580842 1059 ntBASIC20.38■□□□□ 0.85
IGKV3-11P04433 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3-11P04433 LINC01960-201ENST00000563759 1884 ntBASIC20.38■□□□□ 0.85
IGKV3-11P04433 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3-11P04433 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.38■□□□□ 0.85
IGKV3-11P04433 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.37■□□□□ 0.85
IGKV3-11P04433 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.37■□□□□ 0.85
IGKV3-11P04433 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV3-11P04433 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.36■□□□□ 0.85
IGKV3-11P04433 IGHV3-19-201ENST00000521488 291 ntBASIC20.36■□□□□ 0.85
IGKV3-11P04433 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3-11P04433 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.36■□□□□ 0.85
IGKV3-11P04433 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV3-11P04433 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.35■□□□□ 0.85
IGKV3-11P04433 AC019069.1-201ENST00000610008 1333 ntBASIC20.35■□□□□ 0.85
IGKV3-11P04433 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV3-11P04433 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV3-11P04433 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.35■□□□□ 0.85
IGKV3-11P04433 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
IGKV3-11P04433 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.35■□□□□ 0.85
IGKV3-11P04433 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.35■□□□□ 0.85
IGKV3-11P04433 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.34■□□□□ 0.85
IGKV3-11P04433 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
IGKV3-11P04433 AC105265.2-201ENST00000467189 838 ntBASIC20.34■□□□□ 0.85
IGKV3-11P04433 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3-11P04433 AC087742.1-201ENST00000575880 1738 ntBASIC20.33■□□□□ 0.85
IGKV3-11P04433 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV3-11P04433 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV3-11P04433 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV3-11P04433 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV3-11P04433 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.33■□□□□ 0.85
IGKV3-11P04433 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV3-11P04433 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV3-11P04433 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV3-11P04433 TSPY26P-201ENST00000476365 1326 ntBASIC20.32■□□□□ 0.84
IGKV3-11P04433 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
IGKV3-11P04433 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV3-11P04433 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV3-11P04433 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.32■□□□□ 0.84
IGKV3-11P04433 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV3-11P04433 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV3-11P04433 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms