Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC127496.7-201ENST00000625110 1798 ntBASIC19.8■□□□□ 0.76
RAF1P04049 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RAF1P04049 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.8■□□□□ 0.76
RAF1P04049 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RAF1P04049 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAF1P04049 LINC00526-201ENST00000581067 1875 ntBASIC19.79■□□□□ 0.76
RAF1P04049 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 AC097381.1-201ENST00000429019 1296 ntBASIC19.79■□□□□ 0.76
RAF1P04049 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.79■□□□□ 0.76
RAF1P04049 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
RAF1P04049 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.79■□□□□ 0.76
RAF1P04049 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 GUSBP5-202ENST00000510805 1989 ntBASIC19.79■□□□□ 0.76
RAF1P04049 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RAF1P04049 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAF1P04049 SYT6-210ENST00000641643 1587 ntBASIC19.78■□□□□ 0.76
RAF1P04049 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.78■□□□□ 0.76
RAF1P04049 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAF1P04049 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAF1P04049 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.78■□□□□ 0.76
RAF1P04049 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.78■□□□□ 0.76
RAF1P04049 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAF1P04049 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.78■□□□□ 0.76
RAF1P04049 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.78■□□□□ 0.76
RAF1P04049 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.78■□□□□ 0.76
RAF1P04049 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAF1P04049 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAF1P04049 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAF1P04049 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAF1P04049 AC005703.6-201ENST00000623265 1329 ntBASIC19.77■□□□□ 0.76
RAF1P04049 ECEL1P1-201ENST00000373592 1742 ntBASIC19.77■□□□□ 0.76
RAF1P04049 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAF1P04049 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.77■□□□□ 0.76
RAF1P04049 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAF1P04049 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAF1P04049 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.77■□□□□ 0.76
RAF1P04049 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAF1P04049 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAF1P04049 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.77■□□□□ 0.75
RAF1P04049 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAF1P04049 AC137767.1-201ENST00000602918 1920 ntBASIC19.76■□□□□ 0.75
RAF1P04049 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.76■□□□□ 0.75
RAF1P04049 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAF1P04049 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAF1P04049 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.75■□□□□ 0.75
RAF1P04049 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.75■□□□□ 0.75
RAF1P04049 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.75■□□□□ 0.75
RAF1P04049 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAF1P04049 MIR4767-201ENST00000582827 78 ntBASIC19.75■□□□□ 0.75
RAF1P04049 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.75■□□□□ 0.75
RAF1P04049 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RAF1P04049 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.75■□□□□ 0.75
RAF1P04049 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RAF1P04049 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAF1P04049 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.74■□□□□ 0.75
RAF1P04049 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.74■□□□□ 0.75
RAF1P04049 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.74■□□□□ 0.75
RAF1P04049 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.74■□□□□ 0.75
RAF1P04049 CA15P2-201ENST00000611168 834 ntBASIC19.74■□□□□ 0.75
RAF1P04049 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.74■□□□□ 0.75
RAF1P04049 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.74■□□□□ 0.75
RAF1P04049 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAF1P04049 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 RASA4CP-201ENST00000424092 1398 ntBASIC19.73■□□□□ 0.75
RAF1P04049 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.73■□□□□ 0.75
RAF1P04049 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.73■□□□□ 0.75
RAF1P04049 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms