Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.51■□□□□ 0.87
OPN1SWP03999 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OPN1SWP03999 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
OPN1SWP03999 BX664725.1-201ENST00000438252 379 ntBASIC20.51■□□□□ 0.87
OPN1SWP03999 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.51■□□□□ 0.87
OPN1SWP03999 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN1SWP03999 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN1SWP03999 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
OPN1SWP03999 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN1SWP03999 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN1SWP03999 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
OPN1SWP03999 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN1SWP03999 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
OPN1SWP03999 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN1SWP03999 AL137060.1-201ENST00000618151 2648 ntBASIC20.5■□□□□ 0.87
OPN1SWP03999 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.5■□□□□ 0.87
OPN1SWP03999 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.5■□□□□ 0.87
OPN1SWP03999 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
OPN1SWP03999 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
OPN1SWP03999 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.49■□□□□ 0.87
OPN1SWP03999 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPN1SWP03999 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.48■□□□□ 0.87
OPN1SWP03999 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.48■□□□□ 0.87
OPN1SWP03999 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
OPN1SWP03999 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
OPN1SWP03999 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN1SWP03999 LINC01960-201ENST00000563759 1884 ntBASIC20.47■□□□□ 0.87
OPN1SWP03999 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN1SWP03999 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN1SWP03999 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN1SWP03999 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN1SWP03999 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
OPN1SWP03999 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN1SWP03999 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN1SWP03999 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN1SWP03999 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
OPN1SWP03999 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN1SWP03999 FP325331.1-202ENST00000623531 1380 ntBASIC20.46■□□□□ 0.87
OPN1SWP03999 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.46■□□□□ 0.87
OPN1SWP03999 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.46■□□□□ 0.87
OPN1SWP03999 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.46■□□□□ 0.87
OPN1SWP03999 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.46■□□□□ 0.87
OPN1SWP03999 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.46■□□□□ 0.87
OPN1SWP03999 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
OPN1SWP03999 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
OPN1SWP03999 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN1SWP03999 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
OPN1SWP03999 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.45■□□□□ 0.86
OPN1SWP03999 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
OPN1SWP03999 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
OPN1SWP03999 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
OPN1SWP03999 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN1SWP03999 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.45■□□□□ 0.86
OPN1SWP03999 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.45■□□□□ 0.86
OPN1SWP03999 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
OPN1SWP03999 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN1SWP03999 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN1SWP03999 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN1SWP03999 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
OPN1SWP03999 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN1SWP03999 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
OPN1SWP03999 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
OPN1SWP03999 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN1SWP03999 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.44■□□□□ 0.86
OPN1SWP03999 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN1SWP03999 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
OPN1SWP03999 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
OPN1SWP03999 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
OPN1SWP03999 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.43■□□□□ 0.86
OPN1SWP03999 AC092028.1-203ENST00000608262 953 ntBASIC20.43■□□□□ 0.86
OPN1SWP03999 AC009086.3-201ENST00000623486 1008 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms