Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
MBD4O95243 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MBD4O95243 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
MBD4O95243 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
MBD4O95243 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.34■■□□□ 1.81
MBD4O95243 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MBD4O95243 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.34■■□□□ 1.81
MBD4O95243 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.34■■□□□ 1.81
MBD4O95243 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.34■■□□□ 1.81
MBD4O95243 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
MBD4O95243 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
MBD4O95243 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MBD4O95243 DUSP8P5-201ENST00000422884 1815 ntBASIC26.32■■□□□ 1.8
MBD4O95243 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.32■■□□□ 1.8
MBD4O95243 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MBD4O95243 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MBD4O95243 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MBD4O95243 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.32■■□□□ 1.8
MBD4O95243 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.32■■□□□ 1.8
MBD4O95243 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MBD4O95243 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.32■■□□□ 1.8
MBD4O95243 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
MBD4O95243 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.32■■□□□ 1.8
MBD4O95243 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MBD4O95243 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MBD4O95243 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MBD4O95243 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MBD4O95243 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MBD4O95243 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.31■■□□□ 1.8
MBD4O95243 MIR572-201ENST00000384983 95 ntBASIC26.31■■□□□ 1.8
MBD4O95243 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.31■■□□□ 1.8
MBD4O95243 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.31■■□□□ 1.8
MBD4O95243 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.31■■□□□ 1.8
MBD4O95243 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
MBD4O95243 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
MBD4O95243 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
MBD4O95243 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
MBD4O95243 RARRES2P6-201ENST00000567333 442 ntBASIC26.3■■□□□ 1.8
MBD4O95243 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.3■■□□□ 1.8
MBD4O95243 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.3■■□□□ 1.8
MBD4O95243 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.3■■□□□ 1.8
MBD4O95243 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MBD4O95243 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.29■■□□□ 1.8
MBD4O95243 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
MBD4O95243 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
MBD4O95243 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
MBD4O95243 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MBD4O95243 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MBD4O95243 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MBD4O95243 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MBD4O95243 AC026271.2-201ENST00000428091 497 ntBASIC26.28■■□□□ 1.8
MBD4O95243 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.28■■□□□ 1.8
MBD4O95243 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.28■■□□□ 1.8
MBD4O95243 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
MBD4O95243 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.28■■□□□ 1.8
MBD4O95243 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MBD4O95243 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.27■■□□□ 1.8
MBD4O95243 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MBD4O95243 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.27■■□□□ 1.8
MBD4O95243 AC068587.7-201ENST00000641602 218 ntBASIC26.27■■□□□ 1.8
MBD4O95243 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MBD4O95243 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.27■■□□□ 1.8
MBD4O95243 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MBD4O95243 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
MBD4O95243 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MBD4O95243 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.26■■□□□ 1.79
MBD4O95243 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.26■■□□□ 1.79
MBD4O95243 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
MBD4O95243 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.26■■□□□ 1.79
MBD4O95243 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
MBD4O95243 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MBD4O95243 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MBD4O95243 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.26■■□□□ 1.79
MBD4O95243 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.26■■□□□ 1.79
MBD4O95243 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
MBD4O95243 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
MBD4O95243 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.25■■□□□ 1.79
MBD4O95243 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.25■■□□□ 1.79
MBD4O95243 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.25■■□□□ 1.79
MBD4O95243 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.25■■□□□ 1.79
MBD4O95243 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MBD4O95243 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.25■■□□□ 1.79
MBD4O95243 MIR6084-201ENST00000622012 110 ntBASIC26.25■■□□□ 1.79
MBD4O95243 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
MBD4O95243 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms