Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
PCF11O94913 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
PCF11O94913 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
PCF11O94913 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
PCF11O94913 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC34.71■■■■□ 3.15
PCF11O94913 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC34.71■■■■□ 3.15
PCF11O94913 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.71■■■■□ 3.15
PCF11O94913 LINC02228-203ENST00000641970 1355 ntBASIC34.71■■■■□ 3.15
PCF11O94913 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.71■■■■□ 3.15
PCF11O94913 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC34.7■■■■□ 3.15
PCF11O94913 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PCF11O94913 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC34.7■■■■□ 3.15
PCF11O94913 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
PCF11O94913 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PCF11O94913 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.14
PCF11O94913 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.14
PCF11O94913 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.7■■■■□ 3.14
PCF11O94913 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
PCF11O94913 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.69■■■■□ 3.14
PCF11O94913 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
PCF11O94913 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
PCF11O94913 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
PCF11O94913 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC34.69■■■■□ 3.14
PCF11O94913 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCF11O94913 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCF11O94913 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCF11O94913 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
PCF11O94913 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCF11O94913 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.68■■■■□ 3.14
PCF11O94913 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.68■■■■□ 3.14
PCF11O94913 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC34.67■■■■□ 3.14
PCF11O94913 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
PCF11O94913 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC34.67■■■■□ 3.14
PCF11O94913 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.67■■■■□ 3.14
PCF11O94913 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
PCF11O94913 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
PCF11O94913 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PCF11O94913 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
PCF11O94913 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC34.66■■■■□ 3.14
PCF11O94913 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
PCF11O94913 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.66■■■■□ 3.14
PCF11O94913 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PCF11O94913 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PCF11O94913 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC34.65■■■■□ 3.14
PCF11O94913 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
PCF11O94913 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.65■■■■□ 3.14
PCF11O94913 SMUG1P1-201ENST00000590640 811 ntBASIC34.65■■■■□ 3.14
PCF11O94913 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PCF11O94913 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
PCF11O94913 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
PCF11O94913 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PCF11O94913 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC34.64■■■■□ 3.14
PCF11O94913 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
PCF11O94913 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PCF11O94913 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
PCF11O94913 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
PCF11O94913 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
PCF11O94913 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
PCF11O94913 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.63■■■■□ 3.13
PCF11O94913 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.63■■■■□ 3.13
PCF11O94913 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.63■■■■□ 3.13
PCF11O94913 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PCF11O94913 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
PCF11O94913 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC34.62■■■■□ 3.13
PCF11O94913 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
PCF11O94913 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PCF11O94913 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PCF11O94913 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.62■■■■□ 3.13
PCF11O94913 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC34.62■■■■□ 3.13
PCF11O94913 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PCF11O94913 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC34.61■■■■□ 3.13
PCF11O94913 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PCF11O94913 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PCF11O94913 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.61■■■■□ 3.13
PCF11O94913 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.61■■■■□ 3.13
PCF11O94913 AC068587.7-201ENST00000641602 218 ntBASIC34.61■■■■□ 3.13
PCF11O94913 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
PCF11O94913 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC34.6■■■■□ 3.13
PCF11O94913 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
PCF11O94913 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
PCF11O94913 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.6■■■■□ 3.13
PCF11O94913 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
PCF11O94913 AC092068.2-201ENST00000590491 1708 ntBASIC34.6■■■■□ 3.13
PCF11O94913 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC34.6■■■■□ 3.13
PCF11O94913 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PCF11O94913 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.59■■■■□ 3.13
PCF11O94913 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
PCF11O94913 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.59■■■■□ 3.13
PCF11O94913 NTF6G-201ENST00000591094 616 ntBASIC34.59■■■■□ 3.13
PCF11O94913 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.59■■■■□ 3.13
PCF11O94913 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PCF11O94913 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCF11O94913 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC34.58■■■■□ 3.13
PCF11O94913 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCF11O94913 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
PCF11O94913 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.58■■■■□ 3.13
PCF11O94913 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.58■■■■□ 3.13
PCF11O94913 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
PCF11O94913 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC34.58■■■■□ 3.13
PCF11O94913 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC34.58■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms