Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
PRAMEF11O60813 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF11O60813 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.39■■□□□ 1.17
PRAMEF11O60813 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.39■■□□□ 1.17
PRAMEF11O60813 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF11O60813 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF11O60813 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF11O60813 LINC01960-201ENST00000563759 1884 ntBASIC22.39■■□□□ 1.17
PRAMEF11O60813 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.38■■□□□ 1.17
PRAMEF11O60813 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PRAMEF11O60813 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PRAMEF11O60813 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 AC099791.1-201ENST00000416440 715 ntBASIC22.38■■□□□ 1.17
PRAMEF11O60813 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.38■■□□□ 1.17
PRAMEF11O60813 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 AC068473.5-201ENST00000616428 2072 ntBASIC22.38■■□□□ 1.17
PRAMEF11O60813 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF11O60813 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.38■■□□□ 1.17
PRAMEF11O60813 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 C1orf229-201ENST00000623686 2258 ntBASIC22.37■■□□□ 1.17
PRAMEF11O60813 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PRAMEF11O60813 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 AC091305.1-201ENST00000479476 895 ntBASIC22.37■■□□□ 1.17
PRAMEF11O60813 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.37■■□□□ 1.17
PRAMEF11O60813 AC142381.2-201ENST00000566120 298 ntBASIC22.37■■□□□ 1.17
PRAMEF11O60813 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.37■■□□□ 1.17
PRAMEF11O60813 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.37■■□□□ 1.17
PRAMEF11O60813 RASA4CP-201ENST00000424092 1398 ntBASIC22.37■■□□□ 1.17
PRAMEF11O60813 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF11O60813 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 AP005435.1-201ENST00000529293 1178 ntBASIC22.36■■□□□ 1.17
PRAMEF11O60813 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF11O60813 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PRAMEF11O60813 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 AC068587.7-201ENST00000641602 218 ntBASIC22.35■■□□□ 1.17
PRAMEF11O60813 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF11O60813 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.35■■□□□ 1.17
PRAMEF11O60813 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.34■■□□□ 1.17
PRAMEF11O60813 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.34■■□□□ 1.17
PRAMEF11O60813 CA15P2-201ENST00000611168 834 ntBASIC22.34■■□□□ 1.17
PRAMEF11O60813 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PRAMEF11O60813 AC087742.1-201ENST00000575880 1738 ntBASIC22.34■■□□□ 1.17
PRAMEF11O60813 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF11O60813 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PRAMEF11O60813 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF11O60813 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.33■■□□□ 1.17
PRAMEF11O60813 AC126544.1-201ENST00000580842 1059 ntBASIC22.33■■□□□ 1.17
PRAMEF11O60813 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF11O60813 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF11O60813 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PRAMEF11O60813 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.32■■□□□ 1.16
PRAMEF11O60813 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PRAMEF11O60813 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.32■■□□□ 1.16
PRAMEF11O60813 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PRAMEF11O60813 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PRAMEF11O60813 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF11O60813 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF11O60813 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.31■■□□□ 1.16
PRAMEF11O60813 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF11O60813 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.31■■□□□ 1.16
PRAMEF11O60813 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF11O60813 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.31■■□□□ 1.16
PRAMEF11O60813 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PRAMEF11O60813 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms