Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PLOD3O60568 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PLOD3O60568 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PLOD3O60568 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PLOD3O60568 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PLOD3O60568 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
PLOD3O60568 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.64■□□□□ 0.89
PLOD3O60568 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PLOD3O60568 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.64■□□□□ 0.89
PLOD3O60568 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PLOD3O60568 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PLOD3O60568 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
PLOD3O60568 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.63■□□□□ 0.89
PLOD3O60568 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PLOD3O60568 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.63■□□□□ 0.89
PLOD3O60568 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.63■□□□□ 0.89
PLOD3O60568 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PLOD3O60568 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PLOD3O60568 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.63■□□□□ 0.89
PLOD3O60568 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PLOD3O60568 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PLOD3O60568 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PLOD3O60568 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PLOD3O60568 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PLOD3O60568 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.62■□□□□ 0.89
PLOD3O60568 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PLOD3O60568 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.62■□□□□ 0.89
PLOD3O60568 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PLOD3O60568 ESRRAP2-201ENST00000418437 1549 ntBASIC20.62■□□□□ 0.89
PLOD3O60568 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PLOD3O60568 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
PLOD3O60568 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.61■□□□□ 0.89
PLOD3O60568 DUX4L19-201ENST00000557448 1267 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 MIR3181-201ENST00000578512 73 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.61■□□□□ 0.89
PLOD3O60568 pRNA.6-201ENST00000610482 90 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 pRNA.5-201ENST00000612139 90 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 pRNA.11-201ENST00000618423 90 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 pRNA.13-201ENST00000619112 90 ntBASIC20.61■□□□□ 0.89
PLOD3O60568 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PLOD3O60568 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PLOD3O60568 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PLOD3O60568 AC004687.1-201ENST00000579003 1625 ntBASIC20.6■□□□□ 0.89
PLOD3O60568 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PLOD3O60568 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.6■□□□□ 0.89
PLOD3O60568 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PLOD3O60568 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 AC133637.1-201ENST00000624115 1537 ntBASIC20.59■□□□□ 0.89
PLOD3O60568 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PLOD3O60568 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PLOD3O60568 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
PLOD3O60568 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PLOD3O60568 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.59■□□□□ 0.89
PLOD3O60568 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PLOD3O60568 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PLOD3O60568 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PLOD3O60568 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PLOD3O60568 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.58■□□□□ 0.89
PLOD3O60568 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.58■□□□□ 0.89
PLOD3O60568 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.58■□□□□ 0.89
PLOD3O60568 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
PLOD3O60568 AL136116.3-201ENST00000402907 1138 ntBASIC20.58■□□□□ 0.89
PLOD3O60568 AL138724.1-201ENST00000606771 1088 ntBASIC20.58■□□□□ 0.89
PLOD3O60568 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.58■□□□□ 0.89
PLOD3O60568 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms